Ll_transcript_292912

• Id Trinity: TRINITY_DN49117_c1_g4_i8
• Name Transcript: Ll_transcript_292912
• Sequence: ATTGAGTGAAAGGATGAGAGCAGAGAGATATTTTAGAAAGAAGAAAGTAAAGAAAAGAGAGAAACCAGAAAATATCTTCTGAAAATAGATTTTAAAAAAG GTAGTTGAGGTATATACACAACTATACATAAGAGAGAATAAAGATCTTGTTGACCCTCTTTCCATTTCAATTGAAAAAAGCTTATAATTTTACTTTCAAG TAATCCAATTAAATTCAACCCATTTTTGTTCTTCATTTATTCTTGCCCTGTGAACTCGTTTTTCTAACATTCTACGACTCTGATTGAAAGAGATTCTGAT CTCTAAGTGTTTGTGAATATTACTGAGTGAAAAGTCAACAACAAAAACATGGGAAATCCAGAAGTTGTAGAAGAAAGAGAGATTCTTCTGAAGAAGATTA AAGACCTTGAAGCTGTTCAGGTTGACCTGAAACAAGAGATGTCAAAGCTCAAGCTTTCATCATCATTTAAGGATCTTCATCAACAACAACACCATCATCA TCACAGGCATAGGTCTCATTCACTTTCACCACAACGTTCAAGGTTGAGAAAGGAAGCACCAACACCACTTGCATCTAACAAAGCTTCATCATCTTCTCCT TCTTCTTCTTCCCCTTTGCAGAGGGAAAGTAAAAGTGATGAGCTTCAACACCATGGTTCTGTGAACCTCACTGATAGGGAGTGTCTCAATATATTGCAGT CAATGGGTCACTCTCTTCATATATTGGATCTTCAATGCCGAATCATATACTGGAACCCCAGTGCTGAAAATCTGTATGGTTATGTAGCAGCTGAAGTTCT TGGAAGGGATGGGATTGAGCTGCTTATAGATCCCAAGGATTTTGGTTTAGCTAGTGATGTATTCAATCGTGTCACAATGGGAGAGAGCTGGACTGGCCAG TTCCTTTTGAAGAATAAGATTGGGGACAAGTTTTTAGCCGCGGCAACCAATACACCTTTCTACGACGACGGTGGAAACTTGGTTGGGATTATTTGTGTCT CCAGTGATTCAAAACCCTTTCTTGCAATGAAAGTTCCGTTTTCAGGTGTAAAGAATGCTGAACTAGATTCAGGTTCCACCTATCCTAGAAGTAGCATTAC AAGTAAACTTGGGCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCAAAAATTTCAAATGTGGCATCAAAGGTGAGTAACAAGGTTAATTCAAGA ATCTGGGCAGGAGAAGATAATCTCAATCGTGAAGGTGGGAGCGGAGAAAGTCATCATTCTGAGCACCTTTTCTCAGACTCTGCTCTTTCTGATCAGAGAG AAGATGCTAATTCCAGTGGAGCTAGCACTCCTAGAGGAGATCTGCAACCATCTCCTTTTGCTGTATTTTCTCATGTTGACGAGAAATGCCAAGGGAATTC TTTGAGAGACTCTGGCAATGAGAATGAAGGAAAACCTATTCACAAGATCATGGCTTCTAAGGCTGAAGCTTGGATTCAAAAGAGAACATTATCATGGCCA TGGAGAGCAAATGGTCGGGAAGGATCTGAACCAAGGAATGTTCATGTTGCTTGGCCTTGGCTGCCGAGTGATCGAGAAAATGAGTCAGTTAATCATAACA GCGTTTCTTATGGGTTGAAACTTGAGACCCAGGCAGTTGAAAGTAATCAACATGTTAATAATGAGGCTTCAGGATCCTGGTCCTCCTTTAACGTTAACAG CTCAAGTAGTATCAGCAGCTGTGGAAGTAGCAGCAGTTCTACTGTCAATAATAAAGTGGATGCCAACACTGATTGCTTGGATTATGAAATTTTGTGGGAC GACTTGACAATTGGAGAACAAATTGGGCAAGGTGTCATGTTCTTAACTAAAGTGTCATGCATGAGAAAATAAATTTTTGATAATCTATGCATCAACAATG GACAAGCATCTGTTTAAACAACCTTGACATGTTATCTATTTAGAGTTCTTATTTTTGAAGTCCGTGCTTATGAGGCCATGATAATTTAGAGCCCCCTCTT GCAAACCTATATAGTGGTCAATGGTTATTATGCATTGGTATGCTATACCTGCTTTCTATTTAACTGTCTGTTGTTGTATTGCAGGTTCTTGTGGAACTGT TTATCATGCTCTGTGGTATGGATCGGATGTTGCCGTCAAGATTTTCTCAAAGCAATACTCAGATGATGTGATAATGTCCTTCAGACAAGAGGTATCTGTA TTGAAAAGACTTCGTCATCCAAATATTCTCCTCTTTATGGGGGCAGTGACTTCACCTCAACATCTATGCATCGTGACAGAATTTTTCCCACGTGGTAGCT TGTTCCGTATGCTTCAGAGAAACGCAGCCAAACTTGACTGGAGAAGGCGAGTTCAAATGGCCTTAGATATAGCGAGAGGTGTGAATTATCTTCATCATTA CAACCCCCCTATCATTCATCGAGATCTGAAGTCTTCAAATATTCTAGTTGATAAGAATTGGACTGTGAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAG TATGAAGCATTTCTCACAACTAAGACCGGAAGGGGCACGCCCCAGTGGATGGCACCAGAAGTTCTTCGAAATGAACCCTCGGATGAGAAGTCTGACGTTT ACAGCTTTGGGGTGATATTGTGGGAACTCGCAACTAAAAAGATCCCTTGGGATACTCTAAACATAACACAGGTATTGTTTTCTTGTGTACATCAACCATG AAAACTTGTCAAAATCAAAAGATATACAAAGGTATCTGACAGTTTTACTTACCAAATGAAAAGCCATCGATAATTTTGGCCTTCACTGTTGGAACCTTTT AATTTTGTTAGATTCGTTGTTCCAATGTTTGAAGATCAACGATGTTACTATAGAGAATACAAAGTAGCATTTAAAATTGCTTCATTGTATTGCTGTTTGT TTAGTTACTAATTTACACTACCCTAGTAACTGAACTTCTTATTTATTTGTTTTTTGCACATTTCCTTCTGTTTCCACATAAAAACAATCTCTTGTAATTA TGTTTCATTGTCATCTCATATTCAACTATGCATATATGAAAAAAAGTTTCTCTGAGTTGCTTGCAGGTTACTGGAGCCGTAGGGTTTATGAACCATAGGC TAGAAATTCCTGAAGATGTTGATCCACAGTGGGCTTGTATAATCAAGAGCTGCTGGCACAGGTGTGCATTCTTAAGACACTATCATACTTTCTACTTTTC TATTTCTTTCCCATAGCTTTGACTATCCAAGCATAAATCGTATTACTATTGCAAAAGATCATTGATAAATTTAAATGTTATTTGTGTCATAATATTTGAT CAGTTTGCCTAAATTTGATATTTTCATTATCTCTAGACGAGTTACCATCAAAACATTTCGTCTTCACTGTTGGAACCTTTTATTCTTGTTAGATTCGTCG TTCCACTGCTTCTCTTATTTCTTCTAATCGTATTGTTATGTGTTAAAGTCTCAAATCTGTTGAATAATGAATTAGCTTTCTCAATGTACATACTTTGATC AACAGCCACACTGCATTACTTCAAAGACAATTATGCATTTACCTTCAAATACTAACAGCTAATGTAAAACTTTGTCTATGACTAACTACCAGTGATTCAG CTTGCCGGCCAACATTCGAGGAACTTTTAGAAAGGTTGAAAGAACTGCAGAAACAGTTTGCTGTTAAGTTTCAGGCAGCAGCCCGGTCGAATGGCCGGGA AAGCAATCAAAAGGAGTCCTAGACACAGCTTTTCAGATTGTTTCCATTGTGTCACTTGCAGCAGATGATGCATAAGGATTTTTTTGCACATGAGTTCATT GATGAATGATGAGTTTGTAGAAACAGCTGGTTTTGGAGTCATGCAGCATTGCTAGTTTGAATTCTTGGTACCATATGAGGGTGGAAAAATAAATTTAAAA AATGGGAAAATGGTTAATAACCAAACTACATTTTAGTCATTGTTTTCTTTAATGTCATCATAGAAGTTCTTTAATATATATTAGTGATACTGGATCCTTG TTGTTTTGTGAATAGGTTTCCACTATCAGCATTTGTAATTTTATGGAAAATTAATGTTGTACTACTATTTAGTTGTACAGAAGGTAGAAAAAAAGAGAAA ACACAAGAAGTTTCATTTTATTATATACTTCCCTGTGTATTTTCAAATCTATGAGACCACTTTTGGTAATTTCTTTCAAATCAAATTATAGTGTGTGACA ACGGCATTACATGATGTGGTTCACATTTGAAATAATACACTTATTATTCAT
• Tissue: pods
• Gene name: LI_gene_166696;
• Additional information: details;

Expression of Ll_transcript_292912

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.3
• PS3: 0.4
• PW1: 0.2
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292912

• Blastp: -
• Blastx: Serine/threonine-protein kinase CTR1 from Arabidopsis with 62.68% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0002789)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425312.1)
• Pfam: PAS fold (PF00989.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;