Ll_transcript_292913

• Id Trinity: TRINITY_DN49117_c1_g4_i9
• Name Transcript: Ll_transcript_292913
• Sequence: ATTGAGTGAAAGGATGAGAGCAGAGAGATATTTTAGAAAGAAGAAAGTAAAGAAAAGAGAGAAACCAGAAAATATCTTCTGAAAATAGATTTTAAAAAAG GTAGTTGAGGTATATACACAACTATACATAAGAGAGAATAAAGATCTTGTTGACCCTCTTTCCATTTCAATTGAAAAAAGCTTATAATTTTACTTTCAAG TAATCCAATTAAATTCAACCCATTTTTGTTCTTCATTTATTCTTGCCCTGTGAACTCGTTTTTCTAACATTCTACGACTCTGATTGAAAGAGATTCTGAT CTCTAAGTGTTTGTGAATATTACTGAGTGAAAAGTCAACAACAAAAACATGGGAAATCCAGAAGTTGTAGAAGAAAGAGAGATTCTTCTGAAGAAGATTA AAGACCTTGAAGCTGTTCAGGTTGACCTGAAACAAGAGATGTCAAAGCTCAAGCTTTCATCATCATTTAAGGATCTTCATCAACAACAACACCATCATCA TCACAGGCATAGGTCTCATTCACTTTCACCACAACGTTCAAGGTTGAGAAAGGAAGCACCAACACCACTTGCATCTAACAAAGCTTCATCATCTTCTCCT TCTTCTTCTTCCCCTTTGCAGAGGGAAAGTAAAAGTGATGAGCTTCAACACCATGGTTCTGTGAACCTCACTGATAGGGAGTGTCTCAATATATTGCAGT CAATGGGTCACTCTCTTCATATATTGGATCTTCAATGCCGAATCATATACTGGTTAGAACCCCAGTGCTGAAAATCTGTATGGTTATGTAGCAGCTGAAG TTCTTGGAAGGGATGGGATTGAGCTGCTTATAGATCCCAAGGATTTTGGTTTAGCTAGTGATGTATTCAATCGTGTCACAATGGGAGAGAGCTGGACTGG CCAGTTCCTTTTGAAGAATAAGATTGGGGACAAGTTTTTAGCCGCGGCAACCAATACACCTTTCTACGACGACGGTGGAAACTTGGTTGGGATTATTTGT GTCTCCAGTGATTCAAAACCCTTTCTTGCAATGAAAGTTCCGTTTTCAGGTGTAAAGAATGCTGAACTAGATTCAGGTTCCACCTATCCTAGAAGTAGCA TTACAAGTAAACTTGGGCTTGACTCTCAGCAGCCACTTCAAGTTGCTCTAGCATCAAAAATTTCAAATGTGGCATCAAAGGTGAGTAACAAGGTTAATTC AAGAATCTGGGCAGGAGAAGATAATCTCAATCGTGAAGGTGGGAGCGGAGAAAGTCATCATTCTGAGCACCTTTTCTCAGACTCTGCTCTTTCTGATCAG AGAGAAGATGCTAATTCCAGTGGAGCTAGCACTCCTAGAGGAGATCTGCAACCATCTCCTTTTGCTGTATTTTCTCATGTTGACGAGAAATGCCAAGGGA ATTCTTTGAGAGACTCTGGCAATGAGAATGAAGGAAAACCTATTCACAAGATCATGGCTTCTAAGGCTGAAGCTTGGATTCAAAAGAGAACATTATCATG GCCATGGAGAGCAAATGGTCGGGAAGGATCTGAACCAAGGAATGTTCATGTTGCTTGGCCTTGGCTGCCGAGTGATCGAGAAAATGAGTCAGTTAATCAT AACAGCGTTTCTTATGGGTTGAAACTTGAGACCCAGGCAGTTGAAAGTAATCAACATGTTAATAATGAGGCTTCAGGATCCTGGTCCTCCTTTAACGTTA ACAGCTCAAGTAGTATCAGCAGCTGTGGAAGTAGCAGCAGTTCTACTGTCAATAATAAAGTGGATGCCAACACTGATTGCTTGGATTATGAAATTTTGTG GGACGACTTGACAATTGGAGAACAAATTGGGCAAGGTTCTTGTGGAACTGTTTATCATGCTCTGTGGTATGGATCGGATGTTGCCGTCAAGATTTTCTCA AAGCAATACTCAGATGATGTGATAATGTCCTTCAGACAAGAGGTATCTGTATTGAAAAGACTTCGTCATCCAAATATTCTCCTCTTTATGGGGGCAGTGA CTTCACCTCAACATCTATGCATCGTGACAGAATTTTTCCCACGTGGTAGCTTGTTCCGTATGCTTCAGAGAAACGCAGCCAAACTTGACTGGAGAAGGCG AGTTCAAATGGCCTTAGATATAGTGAGTACTTAAAAAGAATCATTATGGGCAAAACATCTCTCTCTCACTTACTTTAAATACATATATCTCATTCTTTGA AACTGGTCCTTTTTTTATCTCCTCTCTCTTCTCCTTCTTGAAATTTTTTTAAAAGCTTCTCTCACTGTGATTGAAACAATGTTGTGTGCTTACTTTTTTC TACAGGCGAGAGGTGTGAATTATCTTCATCATTACAACCCCCCTATCATTCATCGAGATCTGAAGTCTTCAAATATTCTAGTTGATAAGAATTGGACTGT GAAGGTTGGTGATTTTGGTCTTTCACGTCTTAAGTATGAAGCATTTCTCACAACTAAGACCGGAAGGGGCACGCCCCAGTGGATGGCACCAGAAGTTCTT CGAAATGAACCCTCGGATGAGAAGTCTGACGTTTACAGCTTTGGGGTGATATTGTGGGAACTCGCAACTAAAAAGATCCCTTGGGATACTCTAAACATAA CACAGGTATTGTTTTCTTGTGTACATCAACCATGAAAACTTGTCAAAATCAAAAGATATACAAAGGTATCTGACAGTTTTACTTACCAAATGAAAAGCCA TCGATAATTTTGGCCTTCACTGTTGGAACCTTTTAATTTTGTTAGATTCGTTGTTCCAATGTTTGAAGATCAACGATGTTACTATAGAGAATACAAAGTA GCATTTAAAATTGCTTCATTGTATTGCTGTTTGTTTAGTTACTAATTTACACTACCCTAGTAACTGAACTTCTTATTTATTTGTTTTTTGCACATTTCCT TCTGTTTCCACATAAAAACAATCTCTTGTAATTATGTTTCATTGTCATCTCATATTCAACTATGCATATATGAAAAAAAGTTTCTCTGAGTTGCTTGCAG GTTACTGGAGCCGTAGGGTTTATGAACCATAGGCTAGAAATTCCTGAAGATGTTGATCCACAGTGGGCTTGTATAATCAAGAGCTGCTGGCACAGGTGTG CATTCTTAAGACACTATCATACTTTCTACTTTTCTATTTCTTTCCCATAGCTTTGACTATCCAAGCATAAATCGTATTACTATTGCAAAAGATCATTGAT AAATTTAAATGTTATTTGTGTCATAATATTTGATCAGTTTGCCTAAATTTGATATTTTCATTATCTCTAGACGAGTTACCATCAAAACATTTCGTCTTCA CTGTTGGAACCTTTTATTCTTGTTAGATTCGTCGTTCCACTGCTTCTCTTATTTCTTCTAATCGTATTGTTATGTGTTAAAGTCTCAAATCTGTTGAATA ATGAATTAGCTTTCTCAATGTACATACTTTGATCAACAGCCACACTGCATTACTTCAAAGACAATTATGCATTTACCTTCAAATACTAACAGCT
• Tissue: pods
• Gene name: LI_gene_166696;
• Additional information: details;

Expression of Ll_transcript_292913

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.2
• PS3: 0.2
• PW1: 0
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292913

• Blastp: Serine/threonine-protein kinase EDR1 from Arabidopsis with 52.85% of identity
• Blastx: Serine/threonine-protein kinase CTR1 from Arabidopsis with 68.81% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT1G08720)
• CantataDB: Link to cantataDB annotations (CNT0002789)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425312.1)
• Pfam: PAS domain (PF13426.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;