Ll_transcript_293169

• Id Trinity: TRINITY_DN49119_c0_g1_i10
• Name Transcript: Ll_transcript_293169
• Sequence: GTTTGCCCCACATACCTGTGGATGTTTCCGGCTCGGACATGATTGCCTCCGGTGTGAGGATACCTGTGGGAAACCAAAAAAAATAATATTGGACTTTCCT TCGTATATATCTTAAAGGATCATGTCTTATAGCATCTTGATGTATTTGCTTGTGCCTGCTAGTTCTAATTAAATTATCTTCTATATTATGTTTTTGTTGA GTAGCAGCCATTGAAATTACTTTGTTTTTGAAGTATTATATAAGAAGCTGAAAAGTAAAAGGAGAACAAGTCCATTTTTTGGGGCAAATTGAGTGAATAC CATATGGAATATGCTTCTATGATGTGGAATGCTTTAGTTTATTATTTTCCTAACCTATGTCATATTGCTTCAAATATTCCCTTGTTTGTGGAAGGGCATG ATGATGGAATGTTACTTTTGTGCTTGTCGATTTATTGTCGAATACCTTTTCGTTCATTCTGGTATTACTTTAATATGTTCTAATTTGTCAATTATTTTTG GCAGCCTGGCCCAAGGGAGCATCTTCTCCAGTGCTTTATTAAGCGCAACCGGTCCACACAAACATATTACTTGTATCTCAATTTAACTAGTAGTGAGTAT ATAATGAAACTTTTTAGTTAATGTTGTCCCGTAAAAACTTTAGTTTCTTTGTTTTGCTTTGAGATGTCATGCTTTTAATTCTAGTACCGTGTTCCTTTTT ACCATCGTTGTCTTCAATTCAGCACTAGGTGATGACGGGAAGTTCCTTCTGGCTGCACGAAAGTACAGACGTCCCACCTGCACGGATTATATGATCTCTC TAGATGCAGATGATATGTCAAAGGGAAGCAATGCCCATGTTGGGAAACTGAGATCAAATTTCCTCGGAACCAAGTTTACAATCTATGATGCCCAGCCGCC TCATGCCGGGGCAAAGATTCCAAAAAGTCGCTCCACTAGGTTGGTGAATCTTAAACAGGTTTCACCCAGGATTCCTACAGGCAACTATCCAGTGGCACAC ATCTCATTTGAGTTGAATGTGCTTGGCTCCAGGTAAGCTTTCATACCGCCAATTCGACATAGATAATCCTGCATGAAATGTATCGGATAGTTCTATATGC ATATGTTTGGACTGGCCATCTGTAGTTTTCTTTCTTTGACGGGTAGTAATGTTGAGTGGTCTTACTGTGCATTCTTCTTATATACTGACTTGTACAATAC GTAACGTGTTGTGACTAGGGGGCCTAGGAGAATGGATTGTGTCATGGATTCTATTCCTCACTCTGCAATTAAACCAGGAGGAGTAGCCCCGACACAGACT GAGCATTGTCTTAAAAACGTAGATATGTTTCCTTCATTCTCTTTTTCTCGATCAAAGTCAAACCATGTGGAAAACTCCGTATCTGGGCCTCTTGGTGACA GAAACGATGGAGGGTTAGTGTTGAAAAACAAGGCTCCCAGGTGGCACGAGCAGCTGCAGTGTTGGTGCTTAAACTTTCACGGACGTGTGACAATTGCCTC AGTTAAAAACTTTCAGCTGGTGGCTTCTCCGGAAAATGGACCTGCTGGACCAGAACATGATAAGATCATTCTCCAATTCGGAAAAGTCGGGAAGGATGCG TTTACGATGGATTACCGGTACCCTATCTCAGCATTTCAGGCATTTGCAATCTGCCTCAGCAGCTTTGATACCAAGATTGCTTGTGAATAGCATGTATGAA CAGATTTATATTGCTATCTCTTTAGCTCTTGGATGGTGAAGAAGTGAATTTAAAAGGAAGATATTGCATATTTCAGAATTTTAGTTAGTTTCTGGAATCA CAATTCATCACTTCTTGGAAGAATCACATGATATTTGAATGTTACTTAGAAGTTGTGTATCAACTTCCCCATGTAAATAAATTATCTTTTTCCTTTTCTG TTTGTATTTTTTAACATGGTCTTAATTATTTGCCTTAATTAGGTTGTTCATAACTTTATATAGATTTTATTCTACTTCCTTTTTAAATCCACTATCTTTC AGCCTATAATTTACTTGTTATCCATGGTTCCTTAATTGAATATCAAATTACTAAATATTAT
• Tissue: pods
• Gene name: LI_gene_166708;
• Additional information: details;

Expression of Ll_transcript_293169

FPKM

• PAB: 0.8
• PNAB: 0.3
• PS1: 1
• PS2: 1.3
• PS3: 1.8
• PW1: 0.3
• PW2: 0.6
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293169

• Blastp: Tubby-like F-box protein 6 from Oryza sativa with 71.71% of identity
• Blastx: Tubby-like F-box protein 8 from Oryza sativa with 42.97% of identity
• Eggnog: tubby like protein(ENOG410XQFT)
• Kegg: Link to kegg annotations (4332845)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003594006.1)
• Pfam: Tub family (PF01167.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;