| Id Trinity | TRINITY_DN49119_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_293159 |
| Sequence | AAAAAATTTAGAAATTTGAAGGAGGAAAAAATATATGTATTCATATAGTGTATAAATCTTCACTCTTTCTCTCTCAAAACCCTACCCAAAGAAGAATCAC TTTTTAATTATATCCCAAAAAAACAAAAACAACTTTTCCCAGAGGAAAAAAAAGCACTTTTCCCCTCAATCAACTCATTATTTATCTTCTCTTCAAAGTT TGAACCTTTAATCCAATTCCTCCAACCCCATCATCTAAAAATCCCAATTATGCTGAGAACCATAATCCACGACCTCAAATCTCGATCCCACCGTGTGGTT CAAGACGCTTCTTCAATGGATCCGGTGGTGGTTAGCGACGGTTTCACTCAGAGTTTGTGGGCCCACATACCGCAAGAGCTACTGAGAGAAGTGCTTATCA GAATCGAAGCTTCAGAGGACACGTGGCCGCAGAGAAAGAGTGTTGTTGCATGTGCTGGAGTGTGCCGAAGCTGGAGACATATTACTAAGGAGATTGTTAA GTTTCCTCAATTTTCTTCAAAGATCACTTTTCCCATCTCAGTTAAGCAGCCTGGCCCAAGGGAGCATCTTCTCCAGTGCTTTATTAAGCGCAACCGGTCC ACACAAACATATTACTTGTATCTCAATTTAACTAGTACACTAGGTGATGACGGGAAGTTCCTTCTGGCTGCACGAAAGTACAGACGTCCCACCTGCACGG ATTATATGATCTCTCTAGATGCAGATGATATGTCAAAGGGAAGCAATGCCCATGTTGGGAAACTGAGATCAAATTTCCTCGGAACCAAGTTTACAATCTA TGATGCCCAGCCGCCTCATGCCGGGGCAAAGATTCCAAAAAGTCGCTCCACTAGGTTGGTGAATCTTAAACAGGTTTCACCCAGGATTCCTACAGGCAAC TATCCAGTGGCACACATCTCATTTGAGTTGAATGTGCTTGGCTCCAGGTAAGCTTTCATACCGCCAATTCGACATAGATAATCCTGCATGAAATGTATCG GATAGTTCTATATGCATATGTTTGGACTGGCCATCTGTAGTTTTCTTTCTTTGACGGGTAGTAATGTTGAGTGGTCTTACTGTGCATTCTTCTTATATAC TGACTTGTACAATACGTAACGTGTTGTGACTAGGGGGCCTAGGAGAATGGATTGTGTCATGGATTCTATTCCTCACTCTGCAATTAAACCAGGAGGAGTA GCCCCGACACAGACTGAGCATTGTCTTAAAAACGTAGATATGTTTCCTTCATTCTCTTTTTCTCGATCAAAGTCAAACCATGTGGAAAACTCCGTATCTG GGCCTCTTGGTGACAGAAACGATGGAGGGTTAGTGTTGAAAAACAAGGCTCCCAGGTGGCACGAGCAGCTGCAGTGTTGGTGCTTAAACTTTCACGGACG TGTGACAATTGCCTCAGTTAAAAACTTTCAGCTGGTGGCTTCTCCGGAAAATGGACCTGCTGGACCAGAACATGATAAGATCATTCTCCAATTCGGAAAA GTCGGGAAGGATGCGTTTACGATGGATTACCGGTACCCTATCTCAGCATTTCAGGCATTTGCAATCTGCCTCAGCAGCTTTGATACCAAGATTGCTTGTG AATAGCATGTATGAACAGATTTATATTGCTATCTCTTTAGCTCTTGGATGGTGAAGAAGTGAATTTAAAAGGAAGATATTGCATATTTCAGAATTTTAGT TAGTTTCTGGAATCACAATTCATCACTTCTTGGAAGAATCACATGATATTTGAATGTTACTTAGAAGTTGTGTATCAACTTCCCCATGTAAATAAATTAT CTTTTTCCTTTTCTGTTTGTATTTTTTAACATGGTCTTAATTATTTGCCTTAATTAGGTTGTTCATAACTTTATATAGATTTTATTCTACTTCCTTTTTA AATCCACTATCTTTCAGCCTATAATTTACTTGTTATCCATGGTTCCTTAATTGAATATCAAATTACTAAATATTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166708; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_293159
| Blastp | Tubby-like F-box protein 3 from Arabidopsis with 68.89% of identity |
|---|---|
| Blastx | Tubby-like F-box protein 3 from Arabidopsis with 61.04% of identity |
| Eggnog | tubby like protein(ENOG410XQFT) |
| Kegg | Link to kegg annotations (AT2G47900) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419838.1) |
| Pfam | F-box domain (PF00646.32) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |