| Id Trinity | TRINITY_DN49125_c1_g1_i42 |
|---|---|
| Name Transcript | Ll_transcript_292711 |
| Sequence | TTTAAATCAAACGTATGTTTCTGCTCCATTCATCACAACACAACTAGGAGAGAGAGAGAGAAACCAACTTCATCTTTCTCCTACTATCTACTATATCTAT ACATATATATATATACATAATACTTACATAACCCATTTGTTTGACGACCCAACAAGAGAGAGAGAAGAAGAAGAATCCCTTCAGACAGAACAGAGCTACA GCCATGGCTGAATCCGTTTCACACGACATGGAGAGGATCTATCTCACTCGAAAGGAACATCACATTCAGACTGGCTGTGGTTCAGTATCTGTCATAGTCT ATGGGGATCATGACAAACCAGCTCTGATCACTTATCCAGATTTAGCACTAAATTATATGTCATGTTTCGAAGGATTAATTTTCTGTCCGGAGGCTGCGTC TTTGCTCCTTCACAACTTTTGCATATACCACATCAGTCCTCCTGGGCATGAGTTAGGAGCTTCTGCAATTTGTCCCGATGATCCAGTCCCTTCTGCTGAA GACTTAGCTGATCAAATAATTGAAATTCTCAACTATTTTGGGCTTGGTGCGGTAATGTGTATGGGAGTGACGGCTGGTGCTTATATTCTTTCGTTATTCG CAATAAAATATAGAGAGCGTGTTCTTGGTTTAATACTTGTATCTCCTTTGTGCAAAGCACCTTCTTGGAAAGAATGGATTTTTAACAAGGTTCCTTTCGA AAATCAACTCACCATCCATTTATGAGTTCTCTAGTTTTTAACATTCTACCTCAAACTGCTTGTAATTTTCAGGTAATGTCAAATTTATTATATTTCTATG GTGTATGTGGCTTGCTGAAGGAGTGTTTGCTTCAGCGATACTTCAGCAAGGTATTGTAATGCAACAAATCATAATCTCTCTCTCTTGTATTCTCTCTTTT ATATGATATCTTAGAAATTTTAACAGGAAGTTCGTGGTAACGCGGAAGTTCCAGAATCAAAGATAGTCCAAGCTTGCAGAAAAGTCAGTGCTCCTTAGTC CTTACCTTGTCTGTACTGCCCTATACTGGAAGTTGTGTTTACCTCACTTTGCTCTGTTTCATTGTCTTGATTCTTTTTTCAGTTGCTGGATGAGCGAAAG GACGCGAATGTCTTACGGTTTCTCCACGCTATCAATCAGAGGCCTGATATCACAGAAGGATTGAGGAGATTAAAATGCCGTACACTTATTTTTGTTGGTG ACAGTTCTCCTTTCCATTCGGAGGCTCTTTACATGACTTCAAAACTTGATAGGAGATATAGTGCCTTGGTTGAGGTATGTAGTGTAAAATGTGAACAATG ATGTACATGATTAGTACATCTATCATGATGAAGTGCCTTGGTTAAGGTAGTATTTGGTTTCCTGCATGATTTTGACCACATTCTTTGGAATGTGATGCAG CATGCAGAAATGTAAAAGCATTCATGTATATATATATTATTATATATGATGAAAAAATTAGAGAAAAAATGATATTTACGACCAAATGGTATCATTACTT TATACACATTTGAATAGAGGAACATAAAAACATGATGAATGAGTAACCATGGGTTGAGCCGGGCCGGGTCATGCTTGGTCCCAACCTGATCCTAAATATT ATCTGGGTCTATTATTTGAACCCGAACTCGGCACTAGACCTGATCATGATTGAGTCGTGTCGGGTGAGCGGGTAGGGCCGGGTCCTGCTCACCCCTAATT GCATGTACACATAAATATACATAAGCTAGATTTGCATGATATGATATATACTTTATATGGCAGGTCCAGGCTTGTGGATCAATGGTGACAGAGGAACAAC CACATGCAATGGTGATTCCAATGGAATACTTTTTGATGGGTTATGGTTTGTATAGGCCATGCTATTTAAGTCACAGCCCAAGGAGCCCTCTTAGTCCATC ATGCATCTCTCCTGAACTCCTTTCTCCTGAAAGCATGGGATTGAAGCTAAAGCCTATAAAGACACGTCTTTCACTTCAACTTTAATAATATAAATAAATA TATATACTTAAATAATTTAAACAATTCCCTTCTTTTTTTCTCTTCTTTTATCTATAAAAAAATATTGTTTAAGAATTAAGAGGGTTATAGAAGTGGATGG AGGGATAGCAAGTTGTAGATATAAGGGGGATTGAGGATTCTTGGGAATATATAAATATACAGAGGAAAATTTGCCTTCTTTTATTTGTAGTTAAGACATT AAGGAATCATAGTATTGTATCTGTAAATTCTATATGGACTCCTAAATTTATTTATGGTGACCAGCAATCAATAATCCACAGAGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_166737; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292711
| Blastp | Pollen-specific protein SF21 from Helianthus with 74.15% of identity |
|---|---|
| Blastx | Pollen-specific protein SF21 from Helianthus with 47.9% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020215626.1) |
| Pfam | Ndr family (PF03096.13) |
| Rfam | - |
| GO | - |