Ll_transcript_290948

Id TrinityTRINITY_DN49126_c3_g2_i10
Name TranscriptLl_transcript_290948
SequenceTGATGGTGGAGGTGAATTCATATCTAATGCATTCAAGTCACATTGTGAGGAGAATGGTATTAGGCATGAAATCACTGCTCCCTATACACCTCAGCATAAT GGCTTGGCTGAGAGAAGAAACAGGTCAATAATGAACACAACAAGGAGTCTATTGAAAGAGAAGGGCCTGCCACAGAAATTCTGGGGTGAAGCAGTGTCAA CTTCATCCTATATACTCAACAGAAGTCCAACAAAGCAGCTAAATGGTAAAGTACCAATTGAGGTTTGGTCTGGACAGAAACCTAGTGTGAGCCATCTGAA AATATTTGGGTCATTAGCTTTCAAGCATGTCCTGATCAGACTAGAACCAAGTTGCAAGACAAGAGTGAAGCTATGGTACTCATTGGATACCATCCAACAG GTGCCTACAAACTCTACAATCCAATCAAGGATTGTGTGCAAATTAGCAGAGATGTCATAGTCTTAGAGGATGAAAGCTGGATTTGGGCAGAAAACAAGAC TAGTCTTAACAAACCAGTGCCTGAAATTGATGATGCTGCAACCAACACAGTTGATGCTGCAGCAACAACAACTGATAATGAGCCAACCATTGAAACTTCA ATAAGTGAAACTCAGAATGCTCAAAGATCACAGAGAATGAGATCAAGACCAGCAAGATTTAATGACTATGAGCTACATCTTGACAATGAAATCAGTGATG AAGGGGAATTGGTACACTTTGCTCTCATGGCTCTCTTGGCAGAAGCAGAACCAATTAATGAGAAAGATGCCTTGCAAAACTCAGTATGGAAGAGAGCAAT GGATGAAGAAATCAAGTCCATAGAGAAAAACAACACTTGGAATCTGGTTGAATTACCACTTGACAAACATAAAATTGGAGTCAAGTGGGTGTTCAAGCAA AAATTCAACCCTGATGGATCTATATCCAAGTACAAGGCAAGATTGGTGGCAAAGGGCTTTCTACAAAAGGAAGGGCTAGACTACACTGAAGTGTTTGCAC CTGTAGCCAGGATTGAAACAATCAGATTAGTCATTAGCATGGCTTGTGCAAAAGAACGGCAGATGTTTCAACTTGATGTTAAATCTGCCTTCTTGCATGG TCCTCTTCAAGAAGAAGTATATGTCCAGCAGCCTCCTGGATACATCATTGAAGGGAAAGAACATCTTGTCTACAAGTTGAGTAAGGCACTATATGGACTC AAGCAAGCTCCAAGAGCCTGGAACAAGAGAATAGATTCATTTCTCTTTAAACAGCAATTTGAAAAATGTGAAGTAGAGCATGGTGTGTATGTTAAAGAGA GCAGAGATGGGAATCTAGTAATCATTTGCTTGTATGTGGATGACCTATTAATCACAGGGTCAAATCCAAGAGGAATTGCAGAAGTAAAAAGGGTGTTAGA GGCAGAATTTGAAATGACAGATCTTGGCAAGTTGAGCTATTTTCTTGGCATGGAATTCTCCTACACCCCTACTGGTTTGTTGATGCATCAAAGCAAGTAT GCTAAGGAATTGTTGATCAAGTACAACATGAATTCGTGCAATCCAGTCTCAAGTCCAGTAGAAACAAACTTAAGGCTTACCAATGATGAAGGTGGTGAAG CAGTTGATGCCACACAATGCAAGCAAATAGTAGGATCATTGAGGTTCTTATGCAACACAAGACCTGATCTTATCTATGGGGTAGGACTGGTTAGCAGATT CATGAGCAATCCCAAGAAGTCTCATATGCTGGCAGCAAAAAGATTGTTGAGATATGTGAAAGGAACAACAGATTTTGGTGTATTGTTTCCACTGAAATTG CAGAAACCAGAGCTGGAACTAACTGGATATGCAGACTCTGATTTTGGAGGTGATTTGGTTGAGAGAAAGAGTACTTCTGGATACTTATTTTTGCTAAATG GTGCAGCTGTTTCTTGGTGTTCTAAAAAGCAACCAGTGATAGCTTTGTCTAACTGTGAGGCAGAATACATTTCAAGTAGTTATGCAGCATGCCAAGCAGT TTGGCTTGAAGAATTGATCAAGGAGATGAAGATCAAAATCAGATCACCATTGCAGCTAAAAGTTGATAACATTTCAGCCATAAGCTTGTCCAAAAATCCA GTAAGTCATGGTAGGAGCAAGCACATAGAAGTTAGATTTCATTTTCTAAGGAATCTAGTGACCAAGAAGAGGTTGAAGCTGGAATATTGCAGAACTGAGT TACAACTAGCTGATGCATTTACAAAGGCATTGAAGATTGGAAGATTTGAAGAATTAAGGAAGAAGATGGGCATAGAATCTCTTAGGAACTTGTCTTAAGG GAGGATGTTAGAAGTGTATAATCCAAGTGTTTGTAGCTTAGTGTTAGTTGAGTTTTAAACAAACTTTCCTGTTATAGTAACTGTGAATTTGAAATTCTGT TTTAGTGGTTGTAAAGTTTCTATATAAGGAAAGTTCCTCTCATTATGCAATTTGAACAAAGTGCTTGAAGCTTTAATCAAAGACTTACAATTTCTTCTCT TCTTTTCTGTTTTAGCTCTAACACCAGACACTTCAGAATTTGGTTGGTATGAATGTGTAGAAACCTGCTGCTGAAGTGTTTCAAGCCCAATAAGTTGTTG TAGTGTTTTGGTTAATGTGGTTGTTCATGTAAAGAATAAAACTTGTTTTGAAGAGGAACTTCCCTTACTTGAGGATGAGAATAGGTTAACCCATTTATTC TCATCTCATATGCTTCAAATATTTTTATATATCATATTTCTTATATACCATATTTGTTATCTTTATTATTATTGTTATTGACAGATGGAAGCATATTTAT CATCTTTGCATTTGTACTTAAGTGTTGTACTGGTGTATGAGAGAATGCTCTAACAAACATTGTCTCCTTCAGATAATATTGTACCTTTTCTGATTGGTCA GTTCAGCTTGCTTTGGATTGATCAACAACAACTCCTCAAATTCAAAGTTGATATTGTTGAAAGTGAATGAGGATGGGGTGCCTAACTCATAAAGCACTAA CTCATATCTGACTCTGAGATGGAATAGTCAGATATATAAGGTACTACAAAAAGAGGAAATTTTTCAGCTTTTCTAGCAATGGACTTGGACTGAACAACCT GCACCATGGCCTCTTCATAGTGCATGTGTTCTCTTACTATAGCTAGAAGACTTGCTCTTGTCTTTTTTTAAATGTTTATACTTCAATTTTTTTCTTTCTA CAGCCTTTTTATGTTCCAATTAAAGTGACCGATCATAGTGAACAATATACAATATCTTATGATAATATCTTTTTATGTGCTCACTATGTTTCAAGTTGAT GTTTTACATTGTTAATGTTTCCCATATACACTTGGCAGTGCTGTCACTAGGAAAACAATTTGTAACATGCATAAATTATACAAATATGCAGGTATAAATG TA BLAST
Tissuepods
Gene nameLI_gene_166745; 
Additional informationdetails; 

Expression of Ll_transcript_290948

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_290948

BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.37% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.3% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_020987654.1)
PfamReverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;