| Id Trinity | TRINITY_DN49131_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_290963 |
| Sequence | CCACTTTGCACGCAGTTGTATGTTTCTGTTTCCTACCCTTTTGTTCATTGTTAACGTTATTCAAGAGCGAAAGGTGTATTCTGTACTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTATTTTCACAGTGAAGCACGCAATCATTGCATGTCAGACATTGATTTTGAGGAACAACAACAACTACTACGATGTCTTCTGAAG CACTTCTTCAACCGTCCGATGATACAGTTACATTATCTGCTTCTCCTTCATCCAACCGTCATTCTTGGATTTTCGATGAATTGCCCAAAGCAACAATCGT CTCTGTTTCTCGACCAGAAACTGGTGATATCAGTCCAATTCTCCTTTCTTACACTATTGAATTGCATTACAAACAGTTCAAGTGGCGTTTAAAGAAGAAA GCATCACAAGTTCTGTACTTGCAGTTCGCTTTGCGGAAACGTGCACTGATTGAAGAACTATATGATAAGCAAGGCCAGGTGAAAGAATGGCTTCAAAGCT TAGGAATAGGAGATCAAACGGTGATGGTTCAAGATGATGAAGAACCGGATGATGGAGCTGTGCCTTTACATAATGAAGACAGTGTTAAAAACAGATATGT TCCATCTGTTGCTGCTCTTTCAATATTTCGTCCGTCACTAGGAGGGCAGCAGTTAGTAGCAGATAGAGCAAAAGTCGCAATGCAGGGTTATTTGAATCTT TTTTTAGGAAACCTGGATATTGTGAATTCTCAAGAGGTCTGTAAATTTTTGGAGGTCTCCAAGCTATCCTTTTTGCAGGAATATGGTCCAAAACTAAGAG AGGGATATGTGACGGTTAATCATCTGTCACAGGATTCAGATGTGGGATGCCTTCCATGTAATTGGTTTGGTTGTTGTGATAACAAATGGAAGAAGGTATG GGCTGTTTTGAAACCAGGGTTTTTGGCCTTGCTGGATGATCCTTTTCACAACAAACTGTTGGATATAATTGTTTTTGATGTCCTCCCATCCTCAAATGGA GATGAAGGAACCCAAATACATTTAGCTGATCCTATAAAGGAACACAAACCTTTGTGTTACACTTTCAAGGTTACTAGTGGAAATAGGAGCGTAAGGTTGA GAACTACCAGCAGTGCCAAAGCTAATGCTTGGGTTACTGAAATTAATGAAGCTGGTCTAAGACCTCTAGAGGGTTGGTGTCATCCTCACCGCTTTGGTTC ATTTGCTCCGGTGAGAGGCGTGACTAAAGATGGGAGTCAAGCACAATGGTTTGTAGATGGACAGGCAGCATTTGGAGCAATTGCTTCTTCGATTGAAGAT GCTAAGTCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCTGAGCTATATCTAAGGCGGCCTTTTCATAGCTCTTCTACCTTTAGGCTAGACTCGTTAC TAGAAAATAAAGCTAAGCAAGGGGTTCAGATCTATGTGCTTCTTTACAAGGAAGTTTCTATAGCTTTGAAAATAAACAGTTTCTACAGTATGAGAAGACT CCTCAATATTCATGAGAATGTGAGGGTATTGCGTTATCCTGACCATTTAGCAAGTGGTGTGTATTTATGGTCCCACCATGAAAAACTTGTGATTATTGAT TCTAAGATTTGCTATATTGGAGGATTAGATTTATGTTTTGGTCGATATGACACTCCTGAACATAAAGTGGGTGATTGCCCTTCTGTTATATGGCCTGGAA AGGACTATTACAACCCAAGAGAATCTGAGCCAAATTCATGGGAAGACACCATGCGAGATGAATTGGACCGTCAGAAACATCCCCGTATGCCATGGCATGA TGTCCATTGTGCGCTATGGGGACCTCCCTGCCGGGACATTGCTCGGCACTTTGTTCAACGCTGGAATCATGCTAAGAGAACTAAAGCTCCAAATGAAAAT GAAATTCCACTGCTTATGCCGCACCATCACATGGTCATCCCTCATTACTTGGGAAGAAGCAAAGAGATAGAGATTGATGGAAAGAAAGATGAAGAAGACA ACAGGGAAAAAATTGACAGACAGGACTCGTATTCTTTACAGTCTCCATTGCAAGATATACCACTACTTTTACCTCAAGAAGCCGATGGAGTAATTACTTC AAATGAAAATCTCAGGTTAAATGGAAGCAGCATGAACAATAATGTTACTGATCATACAAGTTTAAGTGAAAATGTTCCATTATCATCCCAAAAGCTGGAA GATGAAACTTTAGTTACAGACAATCAGGTGAAAGGGTTTCAAGATGAAGTTGTTCCTTTTAACATGGGGGCACAATCTGTTCTTGATGCTCTAGATGATT GGTGGGAAACACCAAAAGAGGGCACCGATGATGATACTGCTTTGGAATATGGAGAAGTTGGTCCATGTACTACTTGTCAATGTCAGATTATCAGAAGTGT CAGTCAGTGGTCTGCTGGAACAAGTCAGCCTGAAGGAAGCATTCACACTGCATATTGTTCTCTTATTGACAAAGCAAAGCATTTTATTTACATTGAGAAC CAGTTTTTCATATCAGGTCTTGCAGAGGACGATATAATACAGAACCGTATACTGGAAGCACTATATAGGCGTATTTTGCGAGCCCACAGAGAAAAGAAAA TTTTTAGAGTTATAGTTGTGATTCCCCTCTTGCCTGGGTTCCAGGGTGGTCTGGATGATGGTGGTGCTGCAACTGTGAGAGCCTTAACACATTGGCAGTA TAGAACAATTTCTAGAGAAAAGCACTCCATATTACACAATCTTGAAGCTAAACTTGGTCCAAAGGCACATGATTATATTTCTTTCTACGGTCTACGTTCT CATGGTAGACTTTATGAGGATGGCCCTATAGCTACAAATCAGGTTTATGTTCACAGTAAACTGATAATAATAGATGACCGTGTAGCTTGTATTGGATCAT CTAATATAAATGACCGCAGTTTGCTTGGATTAAGAGACTCTGAGATCGGAGTGCTTATAGAAGACCAAGAATATGTTGATTCATTAATGAACGGAAAGCC ATGGAAGGCTGGGAAATTTTCCTATAGCCTCCGTTGCTCCCTATGGTCTGAGCACCTCGGTCTTCATACAGGGGAGATTAGTAAAATCAGTGATCCAGTG GCAGATATAACCTATAATGACCTGTGGTCTGCAACTGCAAAGGAAAATGCTAGGATATACCATGAGGTCTTCGCTTGTGTTCCCAATGATCACATACACT CCAGATCTGCGCTTCGACAAAGCATGGCTCAGTGGAAGGAAAAATTTGGCCATACCACCATGGATTTTGGAATAGCTCCTGATAAGTTAGTATGTCATGA GAATGGAGAAACCAAAGTGGTAGATCCTATCGATAGATTAAAGTCTGTAAAGGGACTTCTTGTTTCCTTTCCTTTGGAGTTCATGCGCGACGAAGATCTT AGACCGGCTTTTATTGAGAGTGAGTTCTATGTATCTCCTCAAGTATATCATTAAGGATGGAAGTTTGGAGGCCAAGAAAGGAAGGAAATTTCAGACATTT TTCATGCAAATTAGAGGACTACTGATTCCTTTCCCATATTCTGTAATAATGTGGATGGCAAGATTTGATGAAAGCACTTTTCCAGATTGAATACCAGAAA TAAAGCTAAAAGAGAAAGATAATACTACTCAGTATTAATTTGTTATGAATGTTAGCAGTAGTTTTAGAAAGGGAAGAGATTGTGCATAATAGTGTTTAAG ACAAATAATAAGTGTGGTTCAGTAAATGTGGGAAGTGTGTGAAAAACTTGGTAGATAGCACAGAAAACATTGGTTAGAGTTAGATGTCAATATGCCATGC AACATTCTTATTGTATAATGCAATGCTAATTTATCTGTTGCAAATGAAATTGTAAATATATTCTTTTTGGGTTAGCTAAGAATTATTGCAGGTTGAGTAT ATAATAGTTTGGTTAAGTTCTTGTGTACATTTTATTGATTATATGTTTTTAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_166788; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_290963
| Blastp | Phospholipase D zeta 1 from Arabidopsis with 66.76% of identity |
|---|---|
| Blastx | Phospholipase D zeta 2 from Arabidopsis with 65.14% of identity |
| Eggnog | Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (By similarity)(COG1502) |
| Kegg | Link to kegg annotations (AT3G16785) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453268.1) |
| Pfam | Phospholipase D Active site motif (PF00614.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |