Ll_transcript_293488

• Id Trinity: TRINITY_DN49132_c2_g1_i13
• Name Transcript: Ll_transcript_293488
• Sequence: TTCCAACCGTAAACCGGTCCAATTATAAAGTTTTGGCATTGAGGGCATAAGTAAAAAAGAAGTATGAAATGGATGAGTGTGATAATTAAAATATGCAATC AGTGTTGGTGCCCAATGTAAGTATATGTGTTGGAAAGCACAGAGCAATTAGCACTAGGCAAAGATTCAGAGTGAAAGCAATGAGAGCAGTGGTTCAGCGA GTTGCCTCTGCTTCCGTCGAAGTTGATGGCCGCATCGTCTCTGAAATTGGACCTGGCCTTCTCGTCCTTGTCGGAATCCACCACTCCGATTCCGATTCCG ACGCCGATTACATATGCCGGAAGGTCTTGAATATGAGATTGTTCTCGAATGAAAACACCGGTAAAACATGGGACCACAGTGTCATCCAGAAAAATTATCA ACTTCTATTAGTGAGTCAGTTTACCTTGTATGGATTCCTCAAGGGTAACAAGCCTGATTTTCACGTTGCAATGCCGCCTCAGCAAGCCAAGACCTTCTAT GCTTCTTTAGTTGAAAGGTTTAGGAATGCCTATAACCCAGATGCTATCAAAGATGGTGTATTTGGGGCAATGATGAAGGTAAATTTAGTTAACGATGGAC CAGTTACCATGCAGCTTGATTCACAATCACCCAAGAATATTGTTGATGCTGCAGAATCTTGACCACTGGTTGATTTGCCTTGAACTTGATGAATGTGAGT TTGAATTCTGACCCATTTGTCAACAAGCCAAATGTAAGAGGTGATTTTTTGTTTATTCCATTTGAAGCTCATTCTCTGCCAGTGTAATTACATTCCCATT TTGTAACACTATTCAACTCAAAGTATACCTGAGGTTGTTCTTGTCCATTATGCTGAATGGATTGTAAAATTAATTTATCAAATTAAATTGCACTTATTAG TTCTTAGTAATTTTCTAAATTTTCTTTCACTCTTTATATGGGTACATATGGATGAAAGTGTAGCCTCAGACTCTATCCAAACAAGGGTTCAATGCCATGT TTCTCGCAATTATACATCTATGAC
• Tissue: pods
• Gene name: LI_gene_166797;
• Additional information: details;

Expression of Ll_transcript_293488

FPKM

• PAB: 4.7
• PNAB: 6.8
• PS1: 6.7
• PS2: 4.2
• PS3: 7.3
• PW1: 8.9
• PW2: 6.5
• PW3: 5.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293488

• Blastp: D-aminoacyl-tRNA deacylase from Dictyostelium with 54% of identity
• Blastx: D-aminoacyl-tRNA deacylase from Dictyostelium with 53.68% of identity
• Eggnog: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine (By similarity)(COG1490)
• Kegg: Link to kegg annotations (DDB_G0291273)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425611.1)
• Pfam: D-Tyr-tRNA(Tyr) deacylase (PF02580.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;