Ll_transcript_293480

• Id Trinity: TRINITY_DN49132_c2_g1_i8
• Name Transcript: Ll_transcript_293480
• Sequence: TTCCAACCGTAAACCGGTCCAATTATAAAGTTTTGGCATTGAGGGCATAAGTAAAAAAGAAGTATGAAATGGATGAGTGTGATAATTAAAATATGCAATC AGTGTTGGTGCCCAATGTAAGTATATGTGTTGGAAAGCACAGAGCAATTAGCACTAGGCAAAGATTCAGAGTGAAAGCAATGAGAGCAGTGGTTCAGCGA GTTGCCTCTGCTTCCGTCGAAGTTGATGGCCGCATCGTCTCTGAAATTGGACCTGGCCTTCTCGTCCTTGTCGGAATCCACCACTCCGATTCCGATTCCG ACGCCGATTACATGTTCTTCTCTACTCTTTTTTCTATTTTTTCTTCCTTTTTTGATTCCAATTATAACTATTCATTCTTTTTCTCAGATGCCGGAAGGTC TTGAATATGAGATTGTTCTCGAATGAAAACACCGGTAAAACATGGGACCACAGTGTCATCCAGAAAAATTATCAACTTCTATTAGGTATTATTCACTCTT TACCTTCAACTTTTACTATGCTACAACAATCACGGTAATGTTGGGAAGTAAGTCTCACATCGCCTACCTCATTGTCTCGGGGATGATTTAAATACCTATT GGGCTACTCTTCTTCTCATTGCCAATTGGTTTTGAGATGAAACCTTAACAGATAATGTAAATTGTAAATTAAACGCATTCAATACATCTAACACTATTTA TTTGTGTTACTTTTCTCTGAAGAGTGAATGATGATTGAATATGAATCGGAGATGATACGGTGATAGTGTATAAAATTCTTACACTACCAGTGTATACATT TCTGAATAATAATTGGAAAGTTGACATTTTTTATTGTTCTACTTGTTTGTAGAGGGATTAGCTTCGGGGTCAACAATTATGTTTGTTGTGTGACCTAAAG GTTATAATTACAAAATCCGGAAACAGACTCTTAGCTTCTCGGATCCTAGTGAGTGAGAGCCTCATGCACGTGGTTGCCTTGAATTTTTTTAATGATTTGT GTTTTTATGCAATTGTATTAGTGAGTCAGTTTACCTTGTATGGATTCCTCAAGGGTAACAAGCCTGATTTTCACGTTGCAATGCCGCCTCAGCAAGCCAA GACCTTCTATGCTTCTTTAGTTGAAAGGTTTAGGAATGCCTATAACCCAGATGCTATCAAAGGTATGTATGTTTCAATTATGTATTAAATAGATAAACAA GCTTCCTTTTAAAGGGTGGGGATCAAGTTACTCCAAGAGTAAGTATAAGAGAGTTACTCTTCATCTTAGC
• Tissue: pods
• Gene name: LI_gene_166797;
• Additional information: details;

Expression of Ll_transcript_293480

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.6
• PS2: 0.3
• PS3: 0.6
• PW1: 0.2
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293480

• Blastp: D-aminoacyl-tRNA deacylase from Carboxydothermus with 41.67% of identity
• Blastx: D-aminoacyl-tRNA deacylase 1 from Bos with 35.4% of identity
• Eggnog: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine (By similarity)(COG1490)
• Kegg: Link to kegg annotations (CHY_2222)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425611.1)
• Pfam: D-Tyr-tRNA(Tyr) deacylase (PF02580.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;