Id Trinity | TRINITY_DN49134_c3_g5_i4 |
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Name Transcript | Ll_transcript_292009 |
Sequence | GCTTCATAATTATTATTATATAAAACCAAACACTGAAAAGAAACCATAACATCCTTCCTAATAATACAACTTATTTTCTTTAGTTTCATCTCTTTTACCA ATGCTTATTTAATATTTTCTTTTCTTGTTTTGTGGTTTTAGACTTTTATTTAGTTCCATTTTCCTTTTGAGTTTTGCGTGAGGGTCCTGTGGGGTTGGGG ATGATGAGTGAAAGTTTGTCTGGGAGTGTGTAACAAGATACGAAATAAGAGATAGAAAGAGATTGGGTCCACCGACCCATAGGCCTTTACCTTCTTTTTC CTATCTATTTTTTGCTTCATATTTTTTCAAAAAAAGTCTTTTATGACACAAGAGAGATGTGAGCAAAACCTGGAAAAATAACTTTTGGAACATAGAAATA AAAAGAAAGAAGCAAAATGGAGTGTGTATATGTGTTGGTGTATCTGCATGACACCAAATCAGTGAATAAACTAAGTTACATACATCACTAGCTGAAAATC CTCATTTAAAACAAGCCAATCTGTTGGGGTGGGGCAGAAGAATCATATGGTAGTACTGCCTCATATGGAGGGGTTGATTTGCTTTTTCTTCCTGTATTCA ACTTACTTAGATATCTCTGCCTTAACTCAATCTTTTGGATATCTTTTCCCCCTCTAGATTCTTCTATATGTTTTGCTTTTAGTATACATGAATTCTATTT GCTTATGAATTATTTTGAGATTGAGAATATATCTGAATTGAAGAAGATTTTCCAGAATTCTGATTGAGTTGTAAGGTTGAAGAAGAAAAAGAACACCTCT AGCTGCAGCTGAAGCAATTTAGAGAAGCCAGGGCTTGTTATATATAAGAGATGGCAGCATCATCTTCCTCAGCATCGCTCTTTGGGTTTAGAGAAGATCA GGATCAGAATCAGATGAATCAACAACATTCATCTTCAGCAACTGCAGCTGCACCAACCCAGAAGAAGAAGAGAAACCAACCTGGAACACCAAATCCAGAT GCGGAGGTGATAGCATTATCTCCAAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAACAAAGGCTTCCAAAGAGAGCAAAACTTACAGC TACACAGAAGAGGACACAACCTGCCTTGGAAGCTTAAGCAGAAGAGTACAAAAGAGCCAAGGAGAAAGGTTTATCTGTGCCCTGAGCCCACTTGTGTCCA TCATGAC BLAST |
Tissue | pods |
Gene name | LI_gene_166820; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292009
Blastp | Protein indeterminate-domain 4, chloroplastic from Arabidopsis with 88.64% of identity |
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Blastx | Protein indeterminate-domain 4, chloroplastic from Arabidopsis with 88.64% of identity |
Eggnog | Zinc finger protein(COG5048) |
Kegg | Link to kegg annotations (AT2G02080) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019441741.1) |
Pfam | C2H2-type zinc finger (PF13912.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |