Ll_transcript_290550

• Id Trinity: TRINITY_DN49138_c0_g2_i12
• Name Transcript: Ll_transcript_290550
• Sequence: TACCTTCCTAACATGAGTTAGGATCCTCTCTAATAACTGAGATGCAAGTATTCCAAAAAGTAAAAAGGAATATAACTTTCAATGAAATATTTATCACTTT GATTACAATGAAATTATACTATTGTCATGAAGAAACATACACTTGTATCTCTATTAATGAATAGATGTTTCTTCTCCTAACCTCTATGCTCCATTTCTCA CATTCACAGTCACACACACATCTTCCTTAAGCAAAGCAACCCTCAAAATCAATCAAATCTTCGTAGTTCTTATACTCACCAACCATACTTCTTCTCACTT CACTTTTTCACAAACACAACACATACACCATTCTCTCTTTTTCCAACCAAATTTTCAGAGCACCATGGACTCTTCTTCCATATATGGTGTCTCTATTTTA CTCCTCCTAACTCTCCTTCCATTTCACTCACATTCCTCAACCACTCAAATTAATTCAAATTCTATTCTCGTTGCGCTTCTCGATTCTCATTACACCGAAC TCGCGGAACTCGTTGAAAAAGCGCTTCTATTGCACAAACTTGAAGACGCTGTTGGAAACTTTAATATTACAATCTTTGCGCCTAGGAACGAAGCATTGGA ACGAAACCTTGACCCTGATTTCAAGCGTTTTTTGCTTGAACCGCGAAACCTAAATTCACTTCAAACGCTTCTCTTGTCTCATATTATTCCGGTAAGAATC GTTGCCGGCGAACACTGGCCGATTGGTGCCGGAGCGGTGGGAGTGAAGCATAGGAGTTTTGGTGGTGAGCATTGTTTGTATTTGAGGGCGGGTGTTTCCG GGAATAGAACTGTGGATAACGCCGCCGTGCTCCGCCCTGATGATGTTATCCGACCTGACGGTGTTATCCATGGGATTGATCAGTTGTTGATTCCTAGATC TGTACAGGAAGATTTTAACCGCCGTCGGAGTCTCCGTTCAATTGCGGCGGTGATACCGGAGGGAGCACCGCAGGTAGATCCTCGAACTAACCGCTTGAAG AAACCGGCTCCGGTACCTGCCGGCGATGCTCCGGTACTCCCGATCTACAACGCGCTAGCTCCGGGACCTTCAATCGCGCCGGCGCCGGCTCCGGGACCCG GCGGTGCGCGGCGGCACTTCAATGGAGAGAGGCAGGTGAAGGATTTCATTCAAACTCTGTTGCACTACGGCGGTTACAACGAGATGGCGGATATACTCGT GAACCTAACGTCGTTAGCGACGGAGATGGGGCGGTTGGTGTCGGAGGGTTACGTTTTAACGGTGTTAGCGCCGAACGACGAAGCGATGGCAAAACTAACG ACCGAGCAGTTAAGCGAACCAGGGGCACCGGAGCAGATCATGTATTATCATATAATTCCGGAGTATCAGACTGAAGAGAGTATGTATAATGCGGTTAGAA GGTTCGGGAAGATTCGATACGATACCTTGCGGCTGCCGCATAAGGTGGTGGCTCAGGAGGCTGATGGTTCGGTTAAATTCGGGCACGGTGATGAGTCTGC TTATTTGTTTGATCCTGATATTTATACAGATGGGAGGATTTCTGTGCAGGGGATTGATGGGGTTTTGTTCCCTTTGGAGGAAGAAACTAACACTGAGCAA ACAACAACAACAACAACTACTCCACTTGTTAAAGTTGCTGCTAAGCCAAGAAGAGGGAAATTGCTTGAAGTGGCATGTAATATGCTTGGAGCTTTTGCAC AAGTTTGCTAATGAAATCGCTTTTTCAACTAATCGCTTAAAAAAATAAAAATAAAGAGGGGATTTATGCAAACATAATGAATGTTGTAGATTAATCAATT TCAATACAAGTGAATCTATAATCAGAAAGCGATTAAGTTGGCAGGATTTCAGTGGGATCACAAAGAGGATTACAACAAATTTTCTGTCATTTTGTTTCAT ACTGTAATTACATATCATTTTTTTATTAAATTTTATTTTATGTTGATTCTATGTTTTTTACCAGTTTGTATGTTGAATCATATTCATACGTAATCTACTT TATTATTATATATATTTGCCTTCCAAATTCGTTTTCTTAATAATACAATTTATCATATCTATGTAGTAGACCTCGCAGCAGAAAATTAAAGTAAATAAAT GATCTTTGCTTAACTTTGGTGCCAAATGTTGAAATGTAGGCTTCATTTATTTTTCATTCATTAAAGTTGTTGTGGGGTTCATTTCATATAAAGCTAAACT TTGTGGTGGCTGCAGTTGTAGGGCACTGATGAAAGAAAACTTGTGGGATTAAGAATGCACCGAC
• Tissue: pods
• Gene name: LI_gene_166862;
• Additional information: details;

Expression of Ll_transcript_290550

FPKM

• PAB: 14.7
• PNAB: 65.6
• PS1: 46.5
• PS2: 45.3
• PS3: 44.4
• PW1: 61.2
• PW2: 63.9
• PW3: 67.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_290550

• Blastp: Fasciclin-like arabinogalactan protein 16 from Arabidopsis with 76.54% of identity
• Blastx: Fasciclin-like arabinogalactan protein 16 from Arabidopsis with 76.07% of identity
• Eggnog: Beta-Ig-H3 fasciclin(COG2335)
• Kegg: Link to kegg annotations (AT2G35860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444186.1)
• Pfam: Fasciclin domain (PF02469.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;