| Id Trinity | TRINITY_DN49138_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_290536 |
| Sequence | TCACAATCTTTGCACCAAAAAACCATGCATTGGAACGTAACCTTGACCCTGAGTTCAAGCGTTTCTTGCTTGAACCCAGAAACCTTAACTCTCTTCAAAC GCTTATAATGTTTCATGTTATCCCAACCACGGTTTTCGCTTCAAAACAGTGGACGGCTGCCGGCGCCGCCGTGCGCCACCAGACACTCGCCGGAGGGAAT GGGTTGAGTTTGGGGGAGGATAGCTCCGGGAACAAGGTTGTTGACTCCGCCGCCGTGCTCCAGCCGGATGACGTCATCAGACCTGACGGCGTCATCCATG GGATTGACCAGTTGCTGATTCCGAGATCTGTGCAGGAAGATTTCAACCGCCGCCGGAGCCTCCGTGCTATTGCGGCGGTGATACCGGAGGGAGCACCGCA GGTGGATCCTCGAACTAACCGTTTGAAGAAACCAGCTCCGGTTCCGGCTGGCGCGCCGCCGGTGCTTCCGATCTACGACGCTGTAGCTCCGGGACCGTCG ATCGCTCCGGCGCCGGCTCCTGGACCCGGCGGTGCACGGCGGCACTTCAACGGTGAACGGCAGGTGAAAGATTTCATCCAAACTCTGTTACACTACGGCG GTTACAACGAGATGGCGGATATTCTCGTTAACCTAACGTCGTTAGCGACGGAGATGGGTCAATTGATATCGGAGGGTTACGTTCTAACGGTGTTAGCGCC GAACGACGAGGCGATGGCGAAACTCGCCACGGAACAATTGAGTGAACCGGGAGCACCGGAGCAGATAATGTATTATCATATCATACCGGAGTATCAAACA GAAGAGAGTATGTATAATGCGGTTAGAAGATTCGGGAAAATTCGATACGATACGCTCCGGCTGCCGCATAAGGTGGTGGCTCAGGAGGCTGATGGCTCGG TGAAATTCGGGTCCGGCGATGCCTCGGCTTATCTGTTCGATCCGGATATTTATACAGATGGGAGAATTTCTGTGCAGGGGATTGATGGAGTTTTGTTCCC TTTGGAGGAGAATGAAGAAGACTCTAATACTCAGAAGAGAACAACAACAACAACAACTCCACTTGTTAAAGTTGCTTCTAAACCAAGGAGAGGAAAATTG ATTGAAGTGGCATGTAGTGTGCTCGGAGCTTTTGGACAAGCCTGCTAATGAAATCGATTTTTCAACTAATCGCTTAAAAAATAAAAAGGGAATCTATATA AACATGAAGAATGATGTAGATTAATCAATTTCAATAAAAGTGAATCTATAATCAGAGAGAGCGATTAAGTTGGCAGGATTTCCGTGGAAACTCACAGAAG ATTAACAAATTTTCTGTCATTTTGTTTCATACTGTATGTAATTACCCATCATTTTTTTAATAAACTTTACTTTATGTTTATTCTTTGTCCATGTATGCAT AAATAACCTTTGGAATACGCCACTTCATCACGGGTTGCATGAATAAAACATCATTAAGGTTTTGAAATATTCGCGATAAACCAACTCAGTCTCTCAATGC TCCTGTCTTTAACTATTACATGTTTGTTTGTGATTTGATTTTTAGAGGGGGGAAAAGGGAATGGAAAAATTCGAGACTCATTTCACAGGTGTATTCAATA TAAGTCTCTAATATAATGTCACGTTTATGCTTTTGTATGAAACATATTCTGTTATCAGCTGTGCCCAACTATACTATATATTATTCCTTGATCACCCAAC AAATTATTCCTATTCAGACATTTTTTTAAGTATTATTATGAAGCAAAGGAAAATTCGTTGAACTTAACAAAGAGCATAAATACCTACCACACTTATTTTT TTGGTAATAAGGTGGGGAATTTTCTACAATTGCTTATATGTATATATTAAAAAACCCTTTAAAAACTATTTCCTAAACGCATACTTATATGTTTATATAT TAAACTCTTCCTTCTTATGTCTTACGAATTCGTTCTTGTAGGTAACTATGAGAAAAGTGAATGCTCTTTGATGTTAGAATTATCACTCACACACTCACTC TGTAAAGCACGAGAAAGGAGAAAGGAGAAAGAAAGAAGAAATTGAGTTGCAGTAGAGAAAAGAGATGTATGCAATGTAATTCCTCATGCTTCATTGAAAG TGAAACTTACTATTTATAGTATACAATTCAACTAACTTCTAAAAACAGAAAGTGTACATCTTAACTACCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166862; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_290536
| Blastp | Fasciclin-like arabinogalactan protein 16 from Arabidopsis with 73.78% of identity |
|---|---|
| Blastx | Fasciclin-like arabinogalactan protein 15 from Arabidopsis with 70.68% of identity |
| Eggnog | Beta-Ig-H3 fasciclin(COG2335) |
| Kegg | Link to kegg annotations (AT2G35860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455370.1) |
| Pfam | Fasciclin domain (PF02469.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |