Ll_transcript_290540

• Id Trinity: TRINITY_DN49138_c0_g2_i4
• Name Transcript: Ll_transcript_290540
• Sequence: TACCTTCCTAACATGAGTTAGGATCCTCTCTAATAACTGAGATGCAAGTATTCCAAAAAGTAAAAAGGAATATAACTTTCAATGAAATATTTATCACTTT GATTACAATGAAATTATACTATTGTCATGAAGAAACATACACTTGTATCTCTATTAATGAATAGATGTTTCTTCTCCTAACCTCTATGCTCCATTTCTCA CATTCACAGTCACACACACATCTTCCTTAAGCAAAGCAACCCTCAAAATCAATCAAATCTTCGTAGTTCTTATACTCACCAACCATACTTCTTCTCACTT CACTTTTTCACAAACACAACACATACACCATTCTCTCTTTTTCCAACCAAATTTTCAGAGCACCATGGACTCTTCTTCCATATATGGTGTCTCTATTTTA CTCCTCCTAACTCTCCTTCCATTTCACTCACATTCCTCAACCACTCAAATTAATTCAAATTCTATTCTCGTTGCGCTTCTCGATTCTCATTACACCGAAC TCGCGGAACTCGTTGAAAAAGCGCTTCTATTGCACAAACTTGAAGACGCTGTTGGAAACTTTAATATTACAATCTTTGCGCCTAGGAACGAAGCATTGGA ACGAAACCTTGACCCTGATTTCAAGCGTTTTTTGCTTGAACCGCGAAACCTAAATTCACTTCAAACGCTTCTCTTGTCTCATATTATTCCGGTAAGAATC GTTGCCGGCGAACACTGGCCGATTGGTGCCGGAGCGGTGGGAGTGAAGCATAGGAGTTTTGGTGGTGAGCATTGTTTGTATTTGAGGGCGGGTGTTTCCG GGAATAGAACTGTGGATAACGCCGCCGTGCTCCGCCCTGATGATGTTATCCGACCTGACGGTGTTATCCATGGGATTGATCAGTTGTTGATTCCTAGATC TGTACAGGAAGATTTTAACCGCCGTCGGAGTCTCCGTTCAATTGCGGCGGTGATACCGGAGGGAGCACCGCAGGTAGATCCTCGAACTAACCGCTTGAAG AAACCGGCTCCGGTACCTGCCGGCGATGCTCCGGTACTCCCGATCTACAACGCGCTAGCTCCGGGACCTTCAATCGCGCCGGCGCCGGCTCCGGGACCCG GCGGTGCGCGGCGGCACTTCAATGGAGAGAGGCAGGTGAAGGATTTCATTCAAACTCTGTTGCACTACGGCGGTTACAACGAGATGGCGGATATACTCGT GAACCTAACGTCGTTAGCGACGGAGATGGGGCGGTTGGTGTCGGAGGGTTACGTTTTAACGGTGTTAGCGCCGAACGACGAAGCGATGGCAAAACTAACG ACCGAGCAGTTAAGCGAACCAGGGGCACCGGAGCAGATCATGTATTATCATATAATTCCGGAGTATCAGACTGAAGAGAGTATGTATAATGCGGTTAGAA GGTTCGGGAAGATTCGATACGATACCTTGCGGCTGCCGCATAAGGTGGTGGCTCAGGAGGCTGATGGTTCGGTTAAATTCGGGCACGGTGATGAGTCTGC TTATTTGTTTGATCCTGATATTTATACAGATGGGAGGATTTCTGTGCAGGGGATTGATGGGGTTTTGTTCCCTTTGGAGGAAGAAACTAACACTGAGCAA ACAACAACAACAACAACTACTCCACTTGTTAAAGTTGCTGCTAAACCAAGGAGAGGGAAATTGCTTGAACTTACTTGTAGTATGCTTGGAGCTTTTGGAA AAGTCTGCTAAAGAAATCACTTTCTCAACTAATCGCTTAAAAAAAATAAAAAGAATAAAGAGGGAATTTGTGAAAACGTAATGAATGTTGTAGAGCAATG AATTTGAATACAAGTGAATCTATAATCAGAGAGGGTGATTAAGTTGGCAGAATTTCCTTGGAAACAAACAGAAGATAACAAATTTTCTGTAATTTTGTTT CATACTGTAATTATATATCATCATTTTTTATTAAATTTTACCTTATGTTGATTCTATGTCTCTGTATGCATAAATAACCTTTGAATACTTTTTGTTTCTA TTTTTCTACAAGTTTGTACGTGAATCATATTCATACTTAATCTACATTATTATCATTATACCTTCCAATTTCATTTTCTTGCACCTAGAAAATGGACCTG CCATCAAAAGATTGTATTAAAAAATAATAATGAAATGGACCTTTCAGCTAAACATATTAAAGTAAATAAATGGACCTTTGCTTAGTTTTGGAGCCAAATG TAAGGTTCATTTCTTGTTCATTAAGTAAAGCTCTTAATGGGTTAATAGGATAGTGATGTAAGAGGGTTGTTGTGGG
• Tissue: pods
• Gene name: LI_gene_166862;
• Additional information: details;

Expression of Ll_transcript_290540

FPKM

• PAB: 1.8
• PNAB: 17.2
• PS1: 9.9
• PS2: 14
• PS3: 12.1
• PW1: 16.2
• PW2: 11.1
• PW3: 11.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_290540

• Blastp: Fasciclin-like arabinogalactan protein 16 from Arabidopsis with 76.07% of identity
• Blastx: Fasciclin-like arabinogalactan protein 16 from Arabidopsis with 75.59% of identity
• Eggnog: Beta-Ig-H3 fasciclin(COG2335)
• Kegg: Link to kegg annotations (AT2G35860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444186.1)
• Pfam: Fasciclin domain (PF02469.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;