Id Trinity | TRINITY_DN49138_c0_g2_i5 |
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Name Transcript | Ll_transcript_290541 |
Sequence | GGTTACAACGAGATGGCGGATATTCTCGTTAACCTAACGTCGTTAGCGACGGAGATGGGGCGGTTGGTGTCGGAGGGTTACGTTTTAACGGTGTTAGCGC CGAACGATGAAGCGATGGCGAAACTAACAACAGAACAATTGAGTGAACCTGGAGCACCGGAACAGATAATGTATTATCATATCATTCCAGAGTATCAAAC TGAAGAGAGTATGTACAATGCGGTTAGAAGGTTCGGAAAAATTCGATACGATTCGTTGCGGCTGCCGCATAAGGTGGTGGCTCAGGAGGCTGATGGTTCG GTTAAATTCGGGCACGGTGATGAGTCTGCTTATTTGTTTGATCCTGATATTTATACAGATGGGAGGATTTCTGTGCAGGGGATTGATGGGGTTTTGTTCC CTTTGGAGGAAGAAACTAACACTGAGCAAACAACAACAACAACAACTACTCCACTTGTTAAAGTTGCTGCTAAGCCAAGAAGAGGGAAATTGCTTGAAGT GGCATGTAATATGCTTGGAGCTTTTGCACAAGTTTGCTAATGAAATCGCTTTTTCAACTAATCGCTTAAAAAAATAAAAATAAAGAGGGGATTTATGCAA ACATAATGAATGTTGTAGATTAATCAATTTCAATACAAGTGAATCTATAATCAGAAAGCGATTAAGTTGGCAGGATTTCAGTGGGATCACAAAGAGGATT ACAACAAATTTTCTGTCATTTTGTTTCATACTGTAATTACATATCATTTTTTTATTAAATTTTATTTTATGTTGATTCTATGTTTTTTACCAGTTTGTAT GTTGAATCATATTCATACGTAATCTACTTTATTATTATATATATTTGCCTTCCAAATTCGTTTTCTTAATAATACAATTTATCATATCTATGTAGTAGAC CTCGCAGCAGAAAATTAAAGTAAATAAATGATCTTTGCTTAACTTTGGTGCCAAATGTTGAAATGTAGGCTTCATTTATTTTTCATTCATTAAAGTTGTT GTGGGGTTCATTTCATATAAAGCTAAACTTTGTGGTGGCTGCAGTTGTAGGGCACTGATGAAAGAAAACTTGTGGGATTAAGAATGCACCGAC BLAST |
Tissue | pods |
Gene name | LI_gene_166862; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_290541
Blastp | Fasciclin-like arabinogalactan protein 15 from Arabidopsis with 85.47% of identity |
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Blastx | Fasciclin-like arabinogalactan protein 15 from Arabidopsis with 83.24% of identity |
Eggnog | Beta-Ig-H3 fasciclin(COG2335) |
Kegg | Link to kegg annotations (AT3G52370) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444186.1) |
Pfam | Fasciclin domain (PF02469.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |