Ll_transcript_290552

• Id Trinity: TRINITY_DN49138_c0_g5_i2
• Name Transcript: Ll_transcript_290552
• Sequence: ATTAGTTTAAGATGGTTGCGATTAATAATTAGACGCTTAATCATAGTCCAATTATGAATGAATTAACAAGAAGACAACTAAAAGTCTTGAATGTGATTAA GAGAGCAAAAAACAGAACCATATTATTAACCCACAAAAATCAAAGCAAAAGACACAAAGTGCACATAAACAAAAGAAGTAAGCAAAACAGTATCTGGCAG AGACAAACACATACCATAACATAGTTAGCTTTCTTCAATTTGTCTCTCTGTCTATCTACCTTGCTCTTCTGCTGAAAATGGCCATGGATGCCATTACCAT TATCCATGCCATCTTCACCATTCTCGTACTCCTTCCCATTACCACATTCTCAATCTCATCAACGTCTCAGTCTCAGTCCCAGATCAACTCTAACTCTATC CTTGTTGCTCTGTTAGACTCTCATTACACTGAACTTGCTGAGCTTGTAGAAAAGGCCATGCTCCTTCAGAAACTTGAAGACACTGTTTCAGTTCACAATA TTACCATTTTCGCCCCCAAAAATCAAGCTTTTTTTGACCCAGATTTCAAGCGTTTCCTTCTAGAACCTCGAAATCTCAATTCCCTCCAAACCCTTATCAT GTCTCATATAATCCCAACCCGAATCGGATCCAAAACCGGGTCAGCCCGACACCGCACCCTTGCCGGCGATCACCACCATCTCCGCCTTCAAACCAATTCC ACAACCACCGACACTCAGTGGACTGTCGACGGCGCTTGTATTACGCACCCCGACGCCGTGACCCGACCCGACGGAGTTATCCACGGCATTGACCACCTCC TTGTCCCACGCTCCGTCCAAGATGACTTCAACCACCGCCGTAGCCTCCGGTCAATCTCCGCCGTGAAACCTGAAGGAGCACCTGAAGTGGACCCGAGAAC CCACCGCCTCAAGAAACCAGCGCCACCGTCAAACCCCGGTTCTCAACCGGCGCTACCAATCTCCGACGCATTAGCACCAGGGCCAGCAATATCCCCGGCA CCTGCTCCGGGTCCCGGAGGGCCTCACCACCATTTCAACGGCGAGGCTCAGGTGAAGGATTTCATTCAAACCCTACTCCATTACGGCGGTTACAACGAGA TGGCGGACATTCTCGTAAACCTGACGTCACTCGCCACCGAGATGGGGCGGTTAGTATCGGAGGGTTATGTTTTAACGGTTCTGGCTCCTAATGATGAAGC AATGGCGAAATTAACAACAGACCAATTGAGTGAACCGGGTTCACCCGAACAAATCATGTATTACCATCTCATACCGGAGTATCAAACCGAAGAGAGTATG TATAATTCTGTTAGAAGGTTCGGGAAGGTTAATTATGATACACTCCGTGTGCCACATAAGGTGGTGGCTCAGGAGGCTGATGGGTCGGTTAAATTCGGAG ACGGTGATGGTTCGGCTTATTTGTTCGACCCGGATATTTATACCGATGGCCGGATCTCTGTTCAGGGGATTGATGGGGTGTTGCTTCCTCCAGAGGAGGT GAAGGATGAGACCCGGGTTAAAGCGGGTCAACCCGCTAAGGTTGTGGTCAAGCAGAGAAGAGGAAAATTGATGGAAGCAACATGCTGGATGCTAGGAACC ATTGGACAGCATTCTAGCTTCACCTCTTGCCAATAAAGAATCCCTCATTGATTCTAGCAAGACTCAGTTAAAAAAAAATGCACATGTTTATTGGAAATTC CAAAGATGTAAAAAGTCAACCGAATATGAAATCTATGTTGCTTGAGTGGTTAATAGATGCTGCTGCTATGGGTTTGGTTTTCCCACGTTTTTGTCATGTT TTTCTTTCTTTGTATCTCCTTGTTAATGGAATTGGGACAAAAGCTTCTCAAGTCCCCTCATAATGCAATGCATATATATGTGTAATTTAGATTCAATTCT TACCACCATTACAATTTGTTAGGTGATTGTGTTGGTGGGATGAAATGTTGTGTATTCAGAAAAGCAGGGAACCTGTATCAATTCAATAAGTACTTTGACG CAAGAAATGGAAATGGAAACACATTATATAATAAAATGATTCTTTACTGTAATTTGACATTTTATGGCATTCAACTCATATTTCACTTTAGTCTTGCC
• Tissue: pods
• Gene name: LI_gene_166865;
• Additional information: details;

Expression of Ll_transcript_290552

FPKM

• PAB: 1.4
• PNAB: 171.2
• PS1: 31.9
• PS2: 54.9
• PS3: 51.1
• PW1: 185.8
• PW2: 71.8
• PW3: 59.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_290552

• Blastp: Fasciclin-like arabinogalactan protein 17 from Arabidopsis with 67.69% of identity
• Blastx: Fasciclin-like arabinogalactan protein 17 from Arabidopsis with 70.95% of identity
• Eggnog: Beta-Ig-H3 fasciclin(COG2335)
• Kegg: Link to kegg annotations (AT5G06390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453806.1)
• Pfam: Fasciclin domain (PF02469.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;