| Id Trinity | TRINITY_DN49140_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_292324 |
| Sequence | GAAGAAATAAAAATAGAAAGTATTATTTATTTTTTTTCTGTTTTTTGAAGAAAAATTTATTCTGAAGTTTAATTAAAAAAACAAAGAAGGAATTTTTGTT CTCGTTGATCTTACCCAAATGATTCTATGTCGTGTAGTGTATAAGTACCCATTTGGTTAAGAGATTAGCGAAGTGTGGGCGGGGATGATAATTTGATGCG GAAATTAGAAATTTTGTTACCTAAATCCTATCTCAATTGCATTTTAGTTAATTCTGAATTGATGTCTCCCAATCTTGTAGATTTTTTGCTATTTATTGTT TATGTTAAAAATTAAAATTACTCGTTTTTCTTCAATTTTTGAAACTATCTGTTTTGCATTGACTTTAGCAGTTACTGAATACTGATTCAGGGTAATAACT GCAAAATATATTTACAAGGGTAAGTGGTAACTGGTAGCACTTGATATTATACAACAAACGGTATATCATGTCAGAATTATGTTACTATGTATTTCCCTTT TTTCATGATGAATAGTTTATTACCTGCTGCTGATATTAATAATTACATTTCACTTCTTTTGATTTGTTTGGAGGATTGGTGATATAATTACTTGTTTTCT ACATTACTGGGCAACAACTTGTGGTAATAGGAATAGACGTTTTTCGAGTTTTGGATGAAACTTGTGTATGTATGTACAACTTGAATCATGTTTTTGTCTT GTTGATTAGTTTTAGAGGTTTTGGTCAGGGTGAGGAGGAAAAGGAGTTATGGCAATGTGTTTTTGTATGCCAGTAGATTTCTTGGTGTCTTTGATTGGGG CAGAGCACATAGATTTTCTGTGGGAGATTCTGACCCTTTTAGAGTTTATTCTTTCCTTGCATTGCCTTTTTCCTTTAATGAATATCCTTGCTCTATCATA AAGAAAGTTGTTATTAATTACTGTGTCCATTTGTCTCTTTTGCACACAATAGGCATATACTTTATTTGCCAATTCTCTTTCCCTAATTCATGTTATTTTT GTGAGTTATTTTTATTCTTAACTCAGGAACAACTTTTAAAAACCAAACTGATTTGGGATTTCATCTTTGGCTTTTAATTTTGAAGATCTTTTCTTCAAAC CTGTATTGTTCATATAATAGGTGGCTTGGAAAAAGGTGGAAGCACATACAATCTTCAAGAGACTTCAAATCTTAGGGACAGTGTTGCAATGTTGGATTCT AAAGAAATTATGAAATTCAAATCTTACCAGAATCAGGCTAATTTGTTTGTGAAGGAATATTTGTTAGCAGACCCTTTAATTCCTTATACTTCCATTATTG GTGGCTTTTTTGCTTGCAAGATGGTCTCTGATCTTACTCAGCTTTTTAGCACGGTTTACTTTAAGACGTATTCCAGCCTCACTAAAATCCAACGTATTGA GTGGAATAACCGTGCCATCTCAACCATTCATGCCATTTTCATAACAGCTATGTCGCTGTACTTGGTATTTTGCTCGGATTTATATTCTGACAACCAGGCG GCTGAACTCATTACAGATCGAAGCACTTCAATGTCTACTTTTGCTCTGGGGGTTTCTGTTGGTTACTTCATGGCTGACCTTGGAATGATATTTTGGTTTT TTCCTTCTCTTGGTGGATATGAGTATGTAAGGACCATATTGCTTTTCACTCGTATAGCTAATCGACCTGTCTTGCTTAGCACTTCATCTGGATTCTCTTA TTCAATTTTAAGATATTTCACTTGATAGGAAATTAGATGGGGACGATTATGGACAGATTTGGGTTTCCTTCCCTTTTCTTCCCCCTTTGGTTGGGTCGGG ATTAACGTGACTTCATATTAACATTGTTTCAGGTGATTCACCATCTGTTTTCTTTAGTGGCAGTAGCCTATTCGATGTTGAGTGGGGAAGGGCAGCTATA CACATACATGGTCCTCATCTCCGAGACAACTACTCCAGGGATCAATTTGAGATGGTATCTTGACATAGCTGGAATGAAAAGGTCCAAAGCTTATCTTATC AACGGGGTTGTGATATTCATTGCGTGGCTGGTTGCCAGAATACTTTTGTTCGTTTACATGTTTTACCATGTTTACTTGCACTTTGATCAGGTTGAGCAGA TGCACAACTTCGGGCAAATACTAGTTATCGTTGTGCCGTTGGTGCTATCGATTATGAACTTGGTTTGGTTCTCAAAGATTATCAAAGGGTTGAGGAAGAC ATTGGCAAAGAGGCAGTAAAATTTTTTGGTTAGTGAAGATTATGAGGAATATGAGTATATAAGGCTAGTGTTGATATTCACCTCACTTTGTCTTGCATTT TTTCAGCACCCAAAGATTTAATAGAACTGAAACAACTTAACATGTTTGGATACCTTTTTGGGATCTGAACCATATTTGTATAAATATATGTTAGTTCTGC TTGGTTATGCTCCAACACATCATCACCAACCAAACATGCACTTGAATCAGGTTCCTGCAACAACAAGATTATTCTATTTCATAAGAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_166876; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292324
| Blastp | - |
|---|---|
| Blastx | Transmembrane protein 56-B from Xenopus with 35.07% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459021.1) |
| Pfam | TLC domain (PF03798.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |