Ll_transcript_293274

• Id Trinity: TRINITY_DN49142_c2_g2_i15
• Name Transcript: Ll_transcript_293274
• Sequence: ATTGATTCTCATTAAGTCTCGAGTTTGAGTCTTATCATGAAAATTATCCGTTAGAAGAGTTAAAAGGCCCGGATAAGATTGAGTCTAGTATAATGATATT GCGGGGACAAAAAAATAAAAGTACCTAGTTTGTTTCTTTATCTTGACATTTCCAATTGTGTTCTATCTTTCGACTCAGGCAGTGAAAAGACAAATTGCAT CATCATGTCCGAAAGGACAACGAGAGGTGTGGTTATGGACATGGCGATGATGTCAGGTTTGTTAGTTTTGTTGTTTTTCCCAACGCTCACTTACAGTTAC GCACCTCGTACTCCGTCGCGTCTTAATCGATTCTCCAATTATCTCACCAAACATGAACTTTGGCTTTCTCAAACCCTTGACCACTACTCTCCCTATGATC ACCGCAAATTCCAGCAGCGTTACTATGAGTTCCTCGACTATTTCCAGTTTCCAGATGGACCAATTTTTTTGGTAATCTGCGGTGAATATTCATGCAATGG GATAAAAAATGACTATATTGCTGTTCTGGCAAAGAAATTTGGAGCTGCTGTGGTTTCTCTTGAGCATCGCTATTATGGAAAGAGTTCTCCATTTAAATCT CTGGCAACAGAAAATTTGAGATATCTTTCATCCAAGCAGGCACTCTTCGATTTGGCTGTTTTTCGCCATTATTATCAGGACTCCTTAAACTCAAAGCTTA ATAGAACAAAAGCTGAAAATCCCTGGTTCGTTATTGGTGTTTCATACCCTGGAGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCTCATTTAACATGTGG AAGTCTTGCAAGTTCTGCAGTCGTTCTTTCTGTTTATAACTACACGGAGTTTGATCAACAGGTTGGTGAGTCAGCAGGTGCTGAATGTAAAGCAGCATTA CAAGAAACTACTCAACTTATTGAACAAAAACTGGCAACCAATGCAAAGGCATTGAAGAAATCTTTTAATGCAGCTGAACTTCAAATTGATGGTGACTTCT TGTATTTTTTAGCTGATGCTGCTGCTACATCGTTTCAATATGGAAATCCAGATAAAGTATGCAAGCCTCTTGTTGAAGCAAAGAAATCCGGAGAGGATTT GGTGGTATGCTTTTCAATCTGGCTTCTCCTTACGATAGAATATTATAAAACTGTTACGTAGAGGCCTTTTGTAGATTGAATCTATTATTTTTCGTATTTT TCTGTTCACTTGCATTGCAGTTTTCACAGGAATTACATGGCAAATTAAAAACACCACACTCAATACCTTGGAGTGACCGGTGTTCTAAGTCATAGTTAAT AATTATGTGCCGATAATATATTCGTTCCCTTCATGAGATGCTCCCTATGGTGCAGGGTTAAATCTAACCATCATACCCGATCTATCAACACAACACAAGC CAACACAATGTTTGGTATTTTAATATTGAGTTTGATATTTTATCATACATGACTTCTCCGGATTATGATTGTCGTAGTATGCTCATCAGCTTTCAGCCTT CTCTGTAGTTGCTACATTTTGAAATAGCTTTTTTCCCACATTTCTTTGTCAATTGTGTTTGTCGTAAATAATATACGCAGCCTTACCCATACAGTGGAGA GGCTGTTTCCCGGTTGCATTTATCTGGTTGTGTGTGTTTGACCGAAACTACGTAATTCAATATGCAGGATGCTTATACCAAATATGTCAAAGATTACTTC CTTGGAACCTTTGGAGTTAACATCCAAACTTATGACCAGAAGTATTTGAAAAACACTGCAATTAGCGACGACAGTTCTACTCGGTTATGGTGGTTTCAAG TTTGCACTGAAGTTGCGTACTTTCAGGTTGCTCCCTCAAATGATAGTATACGCTCCTCAAAAGTTGACACAAGATACCATCTGGACCTTTGCAAAAATGT CTTCGGAGACGGCATCTTTCCTGCTGTTGATGCTACTAATTTATACTATGGAGGCACAAAAATTGCTGGTTTAGAAACCTACCTATGCCTTAATTTTTAC GTTTTTCGCTTTTTCATTTATTTATCATATTCGTAATTTACGAAAAATAATATTTGGTTTGTCCTCATTTGGTTTGTCCAAATGTTATTTGCATCAGGTT CAAAAATAATATTTACAAATGGCTCACAGGATCCATGGCGTCATGCATCGAAACAAAATTCATCCCCCGATAGTGAGTCGTCGTTGACTTTTTTTTATCC ATTTAGTTAGTGGCAATATTTCAAAACTGTATTTCTGCAGAATCCAAATAGATTGACTTGAATATGAATATGTGAAGGACTTGATATTTTTGATGAATAT TGTGTAGAAAGTTTATATAGAGGCTAATGCTAATCAATCCCTAAACTTAAGAGATTAGAATTGGCTATCTAAGAAACTAATAACCATAAAATAAAACTAA ATAATATGTCAATACTTTCCCTCAAGTTGGAGCATATATCGAATGCAACTAGCTTGTCACATATATATTATCCTAGGATCCCGGAAAGGTCCGGTGAAGA TATCAGCGAGTTGATTCCTAGGAGCAAACATGGGATGTCTTGATGATGCAAGAGATGGTCTTTTCTCTAATGGAAAGACAATCAATCCCGATATGCTTTG TTCTCTCATGAAAGACCGGATTGGAGGAGAGACAAATATGATTGTTTATCACATATTAACTCCATAGAATCAACTTTGTAGAAATGTAACTCCTGAAGTA AATGCTTCAGCCACTTGAGCTCATCTATAATGTAAGCCATAGTCCGATACCCGACGTCTACACTTGAATTGGCAAGAACATTATGCTTTTTACTCTTCCA GGAGATAAGATTTCTACGTAGGAACACACAGTAACTTGTAGTGGATCGTCTATAATCTAAGCCTCCTGCACAATCTGCATCTGAATACCCAACAATACCA TTTTGACCTCGATTTGTATAACAATTCCATATCCTTGTGATCCTTTTACGTGTCTAAGGATATGTAAAACTACATCCCAATGACTATCACAGGGGAAGTT CGGAATTTGACTGACAACGCTTACAAGATAGGATATATCAGGTCTGGTCATGGTGAGATAATTTAGTTTCCAACTAACCTCCGATTTCAACCTGGATACG AATAATTGACCGAGCTACCTCAATGCCAAGGAAGTAACGCAAATGCCCCAATTCCGAAAATGCTTAAACAAGTGTTGCTTTATAGCTTCGATACCTTCTT GATCATCACCCGAAATCACAATGCATGATGTTGTTCCTTCATTGTGCCATGCATAACTACTGTTATTGTACTTTTCTCTGAATGCTGCTTAATAACCATT CTTAAACCTTTCAGTGCCTTCCTACCTCATCACATGT
• Tissue: pods
• Gene name: LI_gene_166890;
• Additional information: details;

Expression of Ll_transcript_293274

FPKM

• PAB: 0.5
• PNAB: 0.1
• PS1: 0
• PS2: 0.1
• PS3: 0.2
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293274

• Blastp: Probable serine protease EDA2 from Arabidopsis with 63.93% of identity
• Blastx: Probable serine protease EDA2 from Arabidopsis with 63.93% of identity
• Eggnog: protease, serine, 16 (thymus)(ENOG410XSGG)
• Kegg: Link to kegg annotations (AT2G18080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_003612122.1)
• Pfam: Serine carboxypeptidase S28 (PF05577.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;