| Id Trinity | TRINITY_DN49142_c2_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_293263 |
| Sequence | TATACTTACTAATTCAAGTCAGGTAAATAATTAGGATTTTCATAGAATGGATGATTAAGATGTGGAGTAGGTTTTTTAACTCACTATTTGAGTAAGTTGA TCCCTCTTCTGATGATACGAATGGTGTTTATTCATTGTAAAGTGCAGTCTGCAAGGCTTGTTCTGATGAGCTTATAAGGATTTTAGCTTTTATTGCTAGT TTGTTATTGTTATGCAATGACTCATATTTTCTAGATAACAGCAATACAAGCTATGGGCTTGAGCTGATGTAATACATAGTGGTAGCCTCTCAAGGCTCCC GAGGACGTAGGCACAATTGGTCAAACCTCGTTACCAAACTTCTTGTATTATCTCTTTCCTCTATTCTCTTTTACTGTATGATTGTCCGCTTGTTCCCAAT AGTTATAACTTATAAGAGAATGGCTTAATATGAAATTGAAGGTTTTGTGTTTGATATGATTATCAATTCAGTATACACAGAGAACCCAGAAATGTGTGTG TAGAGTATTCCACTAGTTTTTTTGATCTAGTATTCTAGTATAGTAATGTCAACAAACCAAACGCCCCTACAAGAAGGGTTTTATCAATTATTGCTCAATC TCATAGTCCTCTTGCTAATATAGAATTGTACATATAATGATTCTGAAAAAAGTTAGACACATTACTATAGTTAGAGTATTATATTTTGACGGATACAGAC TTGTTGAAATTGAAACTCTTCAAAAAATATATCACATACACACTAGTTTGATAAAAATGGAAGGTTTTTATTTTGGGGGACTGTAGATCTTCAATGGTGG AATCTGTTTGCCGCCTTCACCTATGAAATTCTGATATGGTTCATTGCGGTTATTTGTATGCTGCATATGTGCACTGCAGGATCACCGCAAATTCCAGCAG CGTTACTATGAGTTCCTCGACTATTTCCAGTTTCCAGATGGACCAATTTTTTTGGTAATCTGCGGTGAATATTCATGCAATGGGATAAAAAATGACTATA TTGCTGTTCTGGCAAAGAAATTTGGAGCTGCTGTGGTTTCTCTTGAGCATCGCTATTATGGAAAGAGTTCTCCATTTAAATCTCTGGCAACAGAAAATTT GAGATATCTTTCATCCAAGCAGGCACTCTTCGATTTGGCTGTTTTTCGCCATTATTATCAGGACTCCTTAAACTCAAAGCTTAATAGAACAAAAGCTGAA AATCCCTGGTTCGTTATTGGTGTTTCATACCCTGGAGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCTCATTTAACATGTGGAAGTCTTGCAAGTTCTG CAGTCGTTCTTTCTGTTTATAACTACACGGAGTTTGATCAACAGGTTGGTGAGTCAGCAGGTGCTGAATGTAAAGCAGCATTACAAGAAACTACTCAACT TATTGAACAAAAACTGGCAACCAATGCAAAGGCATTGAAGAAATCTTTTAATGCAGCTGAACTTCAAATTGATGGTGACTTCTTGTATTTTTTAGCTGAT GCTGCTGCTACATCGTTTCAATATGGAAATCCAGATAAAGTATGCAAGCCTCTTGTTGAAGCAAAGAAATCCGGAGAGGATTTGGTGGTATGCTTTTCAA TCTGGCTTCTCCTTACGATAGAATATTATAAAACTGTTACGTAGAGGCCTTTTGTAGATTGAATCTATTATTTTTCGTATTTTTCTGTTCACTTGCATTG CAGTTTTCACAGGAATTACATGGCAAATTAAAAACACCACACTCAATACCTTGGAGTGACCGGTGTTCTAAGTCATAGTTAATAATTATGTGCCGATAAT ATATTCGTTCCCTTCATGAGATGCTCCCTATGGTGCAGGGTTAAATCTAACCATCATACCCGATCTATCAACACAACACAAGCCAACACAATGTTTGGTA TTTTAATATTGAGTTTGATATTTTATCATACATGACTTCTCCGGATTATGATTGTCGTAGTATGCTCATCAGCTTTCAGCCTTCTCTGTAGTTGCTACAT TTTGAAATAGCTTTTTTCCCACATTTCTTTGTCAATTGTGTTTGTCGTAAATAATATACGCAGCCTTACCCATACAGTGGAGAGGCTGTTTCCCGGTTGC ATTTATCTGGTTGTGTGTGTTTGACCGAAACTACGTAATTCAATATGCAGGATGCTTATACCAAATATGTCAAAGATTACTTCCTTGGAACCTTTGGAGT TAACATCCAAACTTATGACCAGAAGTATTTGAAAAACACTGCAATTAGCGACGACAGTTCTACTCGGTTATGGTGGTTTCAAGTTTGCACTGAAGTTGCG TACTTTCAGGTTGCTCCCTCAAATGATAGTATACGCTCCTCAAAAGTTGACACAAGATACCATCTGGACCTTTGCAAAAATGTCTTCGGAGACGGCATCT TTCCTGCTGTTGATGCTACTAATTTATACTATGGAGGCACAAAAATTGCTGGTTTAGAAACCTACCTATGCCTTAATTTTTACGTTTTTCGCTTTTTCAT TTATTTATCATATTCGTAATTTACGAAAAATAATATTTGGTTTGTCCTCATTTGGTTTGTCCAAATGTTATTTGCATCAGGTTCAAAAATAATATTTACA AATGGCTCACAGGATCCATGGCGTCATGCATCGAAACAAAATTCATCCCCCGATAGTGAGTCGTCGTTGACTTTTTTTTATCCATTTAGTTAGTGGCAAT ATTTCAAAACTGTATTTCTGCAGAATCCAAATAGATTGACTTGAATATGAATATGTGAAGGACTTGATATTTTTGATGAATATTGTGTAGAAAGTTTATA TAGAGGCTAATGCTAATCAATCCCTAAACTTAAGAGATTAGAATTGGCTATCTAAGAAACTAATAACCATAAAATAAAACTAAATAATATGTCAATACTT TCCCTCAAGTTGGAGCATATATCGAATGCAACTAGCTTGTCACATATATATTATCCTAGGATCCCGGAAAGGTCCGGTGAAGATATCAGCGAGTTGATTC CTAGGAGCAAACATGGGATGTCTTGATGATGCAAGAGATGGTCTTTTCTCTAATGGAAAGACAATCAATCCCGATATGCTTTGTTCTCTCATGAAAGACC GGATTGGAGGAGAGACAAATATGATTGTTTATCACATATTAACTCCATAGAATCAACTTTGTAGAAATGTAACTCCTGAAGTAAATGCTTCAGCCACTTG AGCTCATCTATAATGTAAGCCATAGTCCGATACCCGACGTCTACACTTGAATTGGCAAGAACATTATGCTTTTTACTCTTCCAGGAGATAAGATTTCTAC GTAGGAACACACAGTAACTTGTAGTGGATCGTCTATAATCTAAGCCTCCTGCACAATCTGCATCTGAATACCCAACAATACCATTTTGACCTCGATTTGT ATAACAATTCCATATCCTTGTGATCCTTTTACGTGTCTAAGGATATGTAAAACTACATCCCAATGACTATCACAGGGGAAGTTCGGAATTTGACTGACAA CGCTTACAAGATAGGATATATCAGGTCTGGTCATGGTGAGATAATTTAGTTTCCAACTAACCTCCGATTTCAACCTGGATACGAATAATTGACCGAGCTA CCTCAATGCCAAGGAAGTAACGCAAATGCCCCAATTCCGAAAATGCTTAAACAAGTGTTGCTTTATAGCTTCGATACCTTCTTGATCATCACCCGAAATC ACAATGCATGATGTTGTTCCTTCATTGTGCCATGCATAACTACTGTTATTGTACTTTTCTCTGAATGCTGCTTAATAACCATTCTTAAACCTTTCAGTGC CTTCCTACCTCATCACATGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166890; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_293263
| Blastp | Probable serine protease EDA2 from Arabidopsis with 53.54% of identity |
|---|---|
| Blastx | Probable serine protease EDA2 from Arabidopsis with 70.73% of identity |
| Eggnog | protease, serine, 16 (thymus)(ENOG410XSGG) |
| Kegg | Link to kegg annotations (AT2G18080) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003612122.1) |
| Pfam | Serine carboxypeptidase S28 (PF05577.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |