Ll_transcript_293355

• Id Trinity: TRINITY_DN49145_c3_g2_i1
• Name Transcript: Ll_transcript_293355
• Sequence: TTCTCATTCTTTCATGCATTGTTTTAATGCTAATTATTATTACCATTATATTTTTGGTGAAAATTCCAATTATTATTTCCATGTGGTACCAACTAACCTC GGTATAAAGTACTGGAGAGTAAAAAACACCGCTTCAGACAAAACATGAAAAACTGCAAATCACACAGCGAAAAGTCACATCCAAGCATCGTTTGTTGTTG TTGTTGTTGAAGCTATCTACGTTATAGAGTTTTCACAAAACAGAGACAACCCAAGCATGTATCTCACACTATACTAGTGCCAAATCTTATATTTCAACCA CAAAAGTCTAAAACTTTGTTTCCAATTCAGAGACCCATTTGCCGGAAGATACCATTTTCCGGCGAGGTTAGTGAGTTTCCGGCTATCAATGGCGGCGGTG GACAATGAAAAATCTGGGTCTGATGGCAAAGTTCGGAGCTTTTGCAATTTGTCATTTTGGCAAACAACTCATGCTTCTTCTTCTTCATCATCGTCTTTTA CTTCTTCAACATATTCTTCTATGCATAGTAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCAAAAACTACGGTTTC CTCCGTGGCTAAATCTCTTCTTCCTACAAGGAGAAGACTTCGTCTCGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGC GCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGGTGCGGTGTCTATATCTACTATTCCTTTTTTTCTAATTAATCTATGTTTCATTTA GAGTATTGACATATAACATTGGGAATTTTTATTAAAATACTTCCAAGATGTTGATAAATTTTGCTATAGTAACTAGAGCATGATAGGTCGTGTAATATAT TGAACAAGACACCAAGAATGTGTTAATCTAGTGGTGTAAGGCCCTACTAGATCCCCAAGGTCGAGAGTTTGATTCTTGGGAGTGACACTTGTTGGAGGGG CAACTACAAACCCGGAAAGAGATTAGTTCTTTGCCCAAAAAGGTAAAGGATACCCTTGATAGTACCAAAAAAAATGCTGAACAAGGCCAAATCTTCATAT TTGCATTTCACCACGTATTTGATAGGATTATGAATAATTCAGCTGTTTATTGAAATATCAATTTTACATAGCTTGCTATATTTATCCACTCTTAATGTTA CTGCTGATGGTGATGTTTTGTTTAGTTTCAAACAACTGCTCCCAAGAGTTGTTATATGCGCCCACCAGGTGGTGTTCTTGCACCTAGTGAAAGTATAATT GCAACCGGTAATTTATCCTCTTCTAAACTAGTGTGAAGCATAAAAAAGTAAATGTTTGTGAGTTGGTCAATTCTCTTAAAATTGGGTCATGTGCTTTGCA GTGTTTAAGTTTGTGGAGCCGCCAGAAAACAACGAGAAACCAATTGAGCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGTGAAA TGGATTATGTACCAGAACTGGTAATGTATTATTGTTACCTTGGCCTCAATGTGAATTGTTTACTCAATTATATCATAATCTTTCCAATGCTGAATAAATC TTTCAACAATTGACTTTGTTAATGTGCTATAAGTGAATCCTTAAGATTATGGAGTTTCACTGTTATGTAAAACACCTTATTTCTAGTGTTACGAATTTCA GTATAGGTTTGATGATGTTGATAAAATCAGTTTTCATAATCCATCTATAGCATATGGCATGTACAACTTAAAATTCTTAGCTTTATCCATGTAAGGATTA ACAACCTAAGTCTATAACATGTCAAACATATTAGTTTCAACATTTTGGACGAAGTGATTTGGTTTCTGTTTAAAGAATACAAAGAACATGCATTGGTCTA AGTACAGCAATTCTTCCATATTGCTTTCAAATACTAATCACAGTTGTGCCATATGATCCCTCACAGTTTGATGAGCAAAGGGATCAAGTATCGGTGGAGC AAATTCTGCGGGTGGTTTTCCTGGACCCTGAACACTCTAACCCTGTAAGATCAATATATCTCAAATATGTCACATGCTCTACATTTTCTGTGAAAGTTTA TAATTTTATATATTGTTTCCTGAAGGCCATGGACAAGCTTAAACGGCAGTTGGCTGAGGCTGAGGCTGCACTGGAAGCAAGAAAGAAGCCTGCAGAGGAG ACGGGTCCTCGAGTAGCCGGAGAAGGACTTGTTATAGATGAATGGGTCATATACATTTTTCATAATTCCCTTACCATTTTTTTCTAGCTTGTATTGGAAT TGAATGATCTTACTTCATGTTCCCTCATTCTTTTCACTTGTTTGTTGTGTAGAAGGAAAGAAGAGAAAGATACCTAGCAAAGCAGCAGGTTGAAGGGGCT CCACCAATGTAAAGTATTGTAATTTTAACTGTGTTTGAGTTGTGTCCTTAATGCTCTCCAATTTTATATTGAGAAATTGATTTCTTGGCCTCTGATCTAT CAGATGTGGTTGAGTGACCTAGCAAAGTGTTCTATAGAGATATTGTGAAAGTATTTCTTTGTTCTATTTCAGTAGCATGTTTGTGGTGTTAGATACCATT GAATTAATACTGTGTTTGATGGTACTTAATTATACTTTTGCATCATCTCCTATAACTTGTAGATAGATTTCTTGGTACTAGAAAAAATGATGTTTTACTA TCAAGTAACTACTGATATGGTTGGAGTTGCT
• Tissue: pods
• Gene name: LI_gene_166918;
• Additional information: details;

Expression of Ll_transcript_293355

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293355

• Blastp: Vesicle-associated protein 4-3 from Arabidopsis with 61.73% of identity
• Blastx: Vesicle-associated protein 4-2 from Arabidopsis with 80% of identity
• Eggnog: Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod (By similarity)(COG5066)
• Kegg: Link to kegg annotations (AT4G05060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448982.1)
• Pfam: MSP (Major sperm protein) domain (PF00635.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;