Ll_transcript_293382

• Id Trinity: TRINITY_DN49145_c3_g2_i10
• Name Transcript: Ll_transcript_293382
• Sequence: TTCTCATTCTTTCATGCATTGTTTTAATGCTAATTATTATTACCATTATATTTTTGGTGAAAATTCCAATTATTATTTCCATGTGGTACCAACTAACCTC GGTATAAAGTACTGGAGAGTAAAAAACACCGCTTCAGACAAAACATGAAAAACTGCAAATCACACAGCGAAAAGTCACATCCAAGCATCGTTTGTTGTTG TTGTTGTTGAAGCTATCTACGTTATAGAGTTTTCACAAAACAGAGACAACCCAAGCATGTATCTCACACTATACTAGTGCCAAATCTTATATTTCAACCA CAAAAGTCTAAAACTTTGTTTCCAATTCAGAGACCCATTTGCCGGAAGATACCATTTTCCGGCGAGGTTAGTGAGTTTCCGGCTATCAATGGCGGCGGTG GACAATGAAAAATCTGGGTCTGATGGCAAAGTTCGGAGCTTTTGCAATTTGTCATTTTGGCAAACAACTCATGCTTCTTCTTCTTCATCATCGTCTTTTA CTTCTTCAACATATTCTTCTATGCATAGTAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCAAAAACTACGGTTTC CTCCGTGGCTAAATCTCTTCTTCCTACAAGGAGAAGACTTCGTCTCGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGC GCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCTCCCAAGAGTTGTTATATGCGCCCACCAGGTGGTGTTCTTG CACCTGGTGAAAGTATAATTGCAACAGTCTTTAAGTTTGTGGAGCCGCCAGAGAACAATGAGAAACCGGTTGAACAAAAAAGCAGTGTTAAGTTTAAAAT CATGAGCTTAAAAGTGAAAGGTGAAACTGACTATGTACCAGAACTGGTATGTCTTATCACTGTCTTGGCAATTTCCATGCTGTTTGGCTTCAATCTTCAT ACTTTAGCTTTTATAACTGCTCAATATGAATTCTTTGCTCCATTGTATCATATTCATTTCAATACTAAATGAAACTTTCAACAACATACCTTCTTAATGT GCTATTACTGAATCCATATGATTATCAAGTTTCACTGTTTTCTGAAGTATCCTATTCTCCGGCTAAAAAGTTTTTAGTTTAATCCAATACAAACCTACAT ACATTGCAATTATCAAATTGATGACAGATAATGAGAAATATGTTTCTTCAAGCCTTATGTTTTTTGCATGTATTAGGTTTGACGTTGTTGATAAAATCAT TTTTCATAATCCATCGATAGCATATGGCGCGTATGACTTATTAATCCATGTAAGGATTAATAGCCCAAGTCTATAATATGTCAATCATATTAATTTCAAC ATTTCAGATAAAGAGATTTGGTTACTGATTACAGAACACAAATGTGCATTGGTTTAAGTAGAACAATTCTTCTATATTGCTTTCAAATACTGACCACAGT TGTGTCATATGATCCCTCACACAGTTTGAGGAGCAAAGGGATCAAGTATCGATAGAACAAATTTTGCGGGTTGTTTTCCTGGACCCTGAACACTCTAGTC CTGCCATGGACAAGCTTAAACGGCAGTTGGCTGAGGCTGAGGCTGCACTGGAAGCAAGAAAGAAGCCTGCAGAGGAGACGGGTCCTCGAGTAGCCGGAGA AGGACTTGTTATAGATGAATGGAAGGAAAGAAGAGAAAGATACCTAGCAAAGCAGCAGGTTGAAGGGGCTCCACCAATGTAAAGTATTGTAATTTTAACT GTGTTTGAGTTGTGTCCTTAATGCTCTCCAATTTTATATTGAGAAATTGATTTCTTGGCCTCTGATCTATCAGATGTGGTTGAGTGACCTAGCAAAGTGT TCTATAGAGATATTGTGAAAGTATTTCTTTGTTCTATTTCAGTAGCATGTTTGTGGTGTTAGATACCATTGAATTAATACTGTGTTTGATGGTACTTAAT TATACTTTTGCATCATCTCCTATAACTTGTAGATAGATTTCTTGGTACTAGAAAAAATGATGTTTTACTATCAAGTAACTACTGATATGGTTGGAGTTGC T
• Tissue: pods
• Gene name: LI_gene_166918;
• Additional information: details;

Expression of Ll_transcript_293382

FPKM

• PAB: 0.4
• PNAB: 1.4
• PS1: 0.8
• PS2: 2.2
• PS3: 1
• PW1: 1.1
• PW2: 1.6
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293382

• Blastp: Vesicle-associated protein 4-2 from Arabidopsis with 83.47% of identity
• Blastx: Vesicle-associated protein 4-2 from Arabidopsis with 83.47% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT4G21450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448982.1)
• Pfam: MSP (Major sperm protein) domain (PF00635.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;