Ll_transcript_293384

• Id Trinity: TRINITY_DN49145_c3_g2_i12
• Name Transcript: Ll_transcript_293384
• Sequence: TTTATTTTTATGCTCTTCAACTCATCTTCTCAACACAATTAACTTCAATCATAAAGGTAGTGGAAAGTAAAAACACCGTTTCGGACAAAACACGAAAAAG TTGCAAATCACATACAGCGAAAAGTCTCAATCAACCTTCGTTTTGTTGAGGCTAGCTACGTTGCAGAGCTTTCACAACCCAAACACGGTATCTGATACAG CACATGTTCCAAATCTATATTTCAACCCCGAAAGTTTAAAACTTCGCCTCCAATTCAAAGACCCAGTTGCCGGAAGGTCCCATTTTCCGGCGAGGTTAGT GAGATTCAGGCTAACAATGGCGGCGGTGGAAAATGAAAAAACTGGGTCAGATGGGAAAGTTTGGAGCTTTTGTAAAATGCCATTTTGGGAAACAACTCAT CCTTCTTCGTCATCGTCTTCTGCTTCTTCAACGTTTTCTTCTATGCACGGTAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCCACTC ATCAACCTTCAACTACGGTTTCTTCCTTGGCTAAATCTCTTTTTCCTACAAGGAGAAGACTCCGTCTTGATCCACCCAACAAGCTTTACTTTCCATATGA ACCTGGTAAGCAAGTTAGGAGCGCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCTCCCAAGAGTTGTTATATG CGCCCACCAGGTGGTGTTCTTGCACCTGGTGAAAGTATAATTGCAACAGTCTTTAAGTTTGTGGAGCCGCCAGAGAACAATGAGAAACCGGTTGAACAAA AAAGCAGTGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGTGAAACTGACTATGTACCAGAACTGGTATGTCTTATCACTGTCTTGGCAATTTCCAT GCTGTTTGGCTTCAATCTTCATACTTTAGCTTTTATAACTGCTCAATATGAATTCTTTGCTCCATTGTATCATATTCATTTCAATACTAAATGAAACTTT CAACAACATACCTTCTTAATGTGCTATTACTGAATCCATATGATTATCAAGTTTCACTGTTTTCTGAAGTATCCTATTCTCCGGCTAAAAAGTTTTTAGT TTAATCCAATACAAACCTACATACATTGCAATTATCAAATTGATGACAGATAATGAGAAATATGTTTCTTCAAGCCTTATGTTTTTTGCATGTATTAGGT TTGACGTTGTTGATAAAATCATTTTTCATAATCCATCGATAGCATATGGCGCGTATGACTTATTAATCCATGTAAGGATTAATAGCCCAAGTCTATAATA TGTCAATCATATTAATTTCAACATTTCAGATAAAGAGATTTGGTTACTGATTACAGAACACAAATGTGCATTGGTTTAAGTAGAACAATTCTTCTATATT GCTTTCAAATACTGACCACAGTTGTGTCATATGATCCCTCACACAGTTTGAGGAGCAAAGGGATCAAGTATCGATAGAACAAATTTTGCGGGTTGTTTTC CTGGACCCTGAACACTCTAGTCCTGTAAGATTAATATATCTCAAATACATCATCACATGCCTCTACCATTTTGTGTGAAATGTTACAATTTTAGATATTG TTTCCTGAAGGCCATGGACAAGCTTAAACGGCAGTTGGCTGAGGCTGAGGCTGCACTGGAAGCAAGAAAGAAGCCTGCAGAGGAGACGGGTCCTCGAGTA GCCGGAGAAGGACTTGTTATAGATGAATGGGTCATATACATTTTTCATAATTCCCTTACCATTTTTTTCTAGCTTGTATTGGAATTGAATGATCTTACTT CATGTTCCCTCATTCTTTTCACTTGTTTGTTGTGTAGAAGGAAAGAAGAGAAAGATACCTAGCAAAGCAGCAGGTTGAAGGGGCTCCACCAATGTAAAGT ATTGTAATTTTAACTGTGTTTGAGTTGTGTCCTTAATGCTCTCCAATTTTATATTGAGAAATTGATTTCTTGGCCTCTGATCTATCAGATGTGGTTGAGT GACCTAGCAAAGTGTTCTATAGAGATATTGTGAAAGTATTTCTTTGTTCTATTTCAGTA
• Tissue: pods
• Gene name: LI_gene_166918;
• Additional information: details;

Expression of Ll_transcript_293384

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.5
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293384

• Blastp: Vesicle-associated protein 4-2 from Arabidopsis with 56.81% of identity
• Blastx: Vesicle-associated protein 4-2 from Arabidopsis with 82.64% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT4G21450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453744.1)
• Pfam: MSP (Major sperm protein) domain (PF00635.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;