| Id Trinity | TRINITY_DN49145_c3_g2_i13 |
|---|---|
| Name Transcript | Ll_transcript_293386 |
| Sequence | GCCTAAACCACAAGCTACCCTTTTGTGTCATTACTTCATGAAGTGTACACTTACCAAAGTAGAGATAACAAAGTAAAAAAGTTGAAAATATGGAAGCAAC TAAAATAATTCAAATGAGAATTTTTACGTATATAAATATTTTGCTGTTTCAAAATTCATATTTCATATTCTTCCTTATTATTTTGAATGCAATTAAGTTA CCCTATTTCCTTGTGGTACCAAGTAACTTCAATCATAAAGGTAGTGGAAAGTAAAAACACCGTTTCGGACAAAACACGAAAAAGTTGCAAATCACATACA GCGAAAAGTCTCAATCAACCTTCGTTTTGTTGAGGCTAGCTACGTTGCAGAGCTTTCACAACCCAAACACGGTATCTGATACAGCACATGTTCCAAATCT ATATTTCAACCCCGAAAGTTTAAAACTTCGCCTCCAATTCAAAGACCCAGTTGCCGGAAGGTCCCATTTTCCGGCGAGGTTAGTGAGATTCAGGCTAACA ATGGCGGCGGTGGAAAATGAAAAAACTGGGTCAGATGGGAAAGTTTGGAGCTTTTGTAAAATGCCATTTTGGGAAACAACTCATCCTTCTTCGTCATCGT CTTCTGCTTCTTCAACGTTTTCTTCTATGCACGGTAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCTTCAACTAC GGTTTCTTCCTTGGCTAAATCTCTTTTTCCTACAAGGAGAAGACTCCGTCTTGATCCACCCAACAAGCTTTACTTTCCATATGAACCTGGTAAGCAAGTT AGGAGCGCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCTCCCAAGAGTTGTTATATGCGCCCACCAGGTGGTG TTCTTGCACCTGGTGAAAGTATAATTGCAACAGTCTTTAAGTTTGTGGAGCCGCCAGAGAACAATGAGAAACCGGTTGAACAAAAAAGCAGTGTTAAGTT TAAAATCATGAGCTTAAAAGTGAAAGGTGAAACTGACTATGTACCAGAACTGTTTGAGGAGCAAAGGGATCAAGTATCGATAGAACAAATTTTGCGGGTT GTTTTCCTGGACCCTGAACACTCTAGTCCTGCCATGGACAAGCTTAAACGGCAGTTGGCTGAGGCTGAGGCTGCACTGGAAGCAAGAAAGAAGCCTGCAG AGGAGACGGGTCCTCGAGTAGCCGGAGAAGGACTTGTTATAGATGAATGGGTCATATACATTTTTCATAATTCCCTTACCATTTTTTTCTAGCTTGTATT GGAATTGAATGATCTTACTTCATGTTCCCTCATTCTTTTCACTTGTTTGTTGTGTAGAAGGAAAGAAGAGAAAGATACCTAGCAAAGCAGCAGGTTGAAG GGGCTCCACCAATGTAAAGTATTGTAATTTTAACTGTGTTTGAGTTGTGTCCTTAATGCTCTCCAATTTTATATTGAGAAATTGATTTCTTGGCCTCTGA TCTATCAGATGTGGTTGAGTGACCTAGCAAAGTGTTCTATAGAGATATTGTGAAAGTATTTCTTTGTTCTATTTCAGTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_166918; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_293386
| Blastp | Vesicle-associated protein 4-2 from Arabidopsis with 61.65% of identity |
|---|---|
| Blastx | Vesicle-associated protein 4-2 from Arabidopsis with 80.75% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT4G21450) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453744.1) |
| Pfam | MSP (Major sperm protein) domain (PF00635.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |