Ll_transcript_293390

• Id Trinity: TRINITY_DN49145_c3_g2_i16
• Name Transcript: Ll_transcript_293390
• Sequence: GCCTAAACCACAAGCTACCCTTTTGTGTCATTACTTCATGAAGTGTACACTTACCAAAGTAGAGATAACAAAGTAAAAAAGTTGAAAATATGGAAGCAAC TAAAATAATTCAAATGAGAATTTTTACGTATATAAATATTTTGCTGTTTCAAAATTCATATTTCATATTCTTCCTTATTATTTTGAATGCAATTAAGTTA CCCTATTTCCTTGTGGTACCAAGTAACTTCAATCATAAAGGTAGTGGAAAGTAAAAACACCGTTTCGGACAAAACACGAAAAAGTTGCAAATCACATACA GCGAAAAGTCTCAATCAACCTTCGTTTTGTTGAGGCTAGCTACGTTGCAGAGCTTTCACAACCCAAACACGGTATCTGATACAGCACATGTTCCAAATCT ATATTTCAACCCCGAAAGTTTAAAACTTCGCCTCCAATTCAAAGACCCAGTTGCCGGAAGGTCCCATTTTCCGGCGAGGTTAGTGAGATTCAGGCTAACA ATGGCGGCGGTGGAAAATGAAAAAACTGGGTCAGATGGGAAAGTTTGGAGCTTTTGTAAAATGCCATTTTGGGAAACAACTCATCCTTCTTCGTCATCGT CTTCTGCTTCTTCAACGTTTTCTTCTATGCACGGTAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCTTCAACTAC GGTTTCTTCCTTGGCTAAATCTCTTTTTCCTACAAGGAGAAGACTCCGTCTTGATCCACCCAACAAGCTTTACTTTCCATATGAACCTGGTAAGCAAGTT AGGAGCGCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCTCCCAAGAGTTGTTATATGCGCCCACCAGGTGGTG TTCTTGCACCTAGTGAAAGTATAATTGCAACCGTGTTTAAGTTTGTGGAGCCGCCAGAAAACAACGAGAAACCAATTGAGCAGAAAAGCAGGGTTAAGTT TAAAATCATGAGCTTAAAAGTGAAAGGTGAAATGGATTATGTACCAGAACTGGTAATGTATTATTGTTACCTTGGCCTCAATGTGAATTGTTTACTCAAT TATATCATAATCTTTCCAATGCTGAATAAATCTTTCAACAATTGACTTTGTTAATGTGCTATAAGTGAATCCTTAAGATTATGGAGTTTCACTGTTATGT AAAACACCTTATTTCTAGTGTTACGAATTTCAGTATAGGTTTGATGATGTTGATAAAATCAGTTTTCATAATCCATCTATAGCATATGGCATGTACAACT TAAAATTCTTAGCTTTATCCATGTAAGGATTAACAACCTAAGTCTATAACATGTCAAACATATTAGTTTCAACATTTTGGACGAAGTGATTTGGTTTCTG TTTAAAGAATACAAAGAACATGCATTGGTCTAAGTACAGCAATTCTTCCATATTGCTTTCAAATACTAATCACAGTTGTGCCATATGATCCCTCACAGTT TGATGAGCAAAGGGATCAAGTATCGGTGGAGCAAATTCTGCGGGTGGTTTTCCTGGACCCTGAACACTCTAACCCTGCCATGGATAAGCTTAAACGGCAG TTGGCTGAGGCTGAGGCTGCACTGGAAGCAAGAAAGAAGCCCCCGGAGGAGACAGGTCCTCGAATAGCTGGGGAAGGACTTGTTATAGATGAATGGAAAG AAAGAAGAGAAAGATACCTGGCAAAGCAACAGGTTGAAGGGGTTCCATCAATGTAAAGTTTTTTGGTGTCTTGTTCTTAATGTTCTCCAGTTTCATGTTG AGAAAATGAATTCCTTGATCACCAATCTGGCAGATGTGGTCGAGTGACCCAGCAAAGTACTGTAATGAGATATTGTGAAATATTTCTTTGTTCTATTTCA GTAGCATATTTGAGGTGTTATATGATATTGAATTAATACTGTGGCTGGTGGTATTTAATTGTACTTTTGTATTAGCTCCTATAACTTGTTCATAGTTTTA GCTTGTTTGAAGCGAAATTGATAGTAACAGAACTGGTATTTTACCTTCATGTAACTTATAGTTGGGGTTGAATTTGCCTAATATTTTATGGGAGTGGCTA GCCCCTTTGTTTTCTTGTTCACCTTTCTCTTCATCTTACAGTTATGCAGTAGTAAAATGTTTCCATGAACAAGAAAGATCCTTGATTAGTTACAAAAAGA AAAGTGTGATCAAGTTATTAGACTCTCC
• Tissue: pods
• Gene name: LI_gene_166918;
• Additional information: details;

Expression of Ll_transcript_293390

FPKM

• PAB: 1.6
• PNAB: 3
• PS1: 2.3
• PS2: 3.4
• PS3: 1.7
• PW1: 4.6
• PW2: 7.5
• PW3: 5.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293390

• Blastp: Vesicle-associated protein 4-2 from Arabidopsis with 57.01% of identity
• Blastx: Vesicle-associated protein 4-2 from Arabidopsis with 83.47% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT4G21450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453744.1)
• Pfam: MSP (Major sperm protein) domain (PF00635.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;