Ll_transcript_293358

• Id Trinity: TRINITY_DN49145_c3_g2_i3
• Name Transcript: Ll_transcript_293358
• Sequence: TTCTCATTCTTTCATGCATTGTTTTAATGCTAATTATTATTACCATTATATTTTTGGTGAAAATTCCAATTATTATTTCCATGTGGTACCAACTAACCTC GGTATAAAGTACTGGAGAGTAAAAAACACCGCTTCAGACAAAACATGAAAAACTGCAAATCACACAGCGAAAAGTCACATCCAAGCATCGTTTGTTGTTG TTGTTGTTGAAGCTATCTACGTTATAGAGTTTTCACAAAACAGAGACAACCCAAGCATGTATCTCACACTATACTAGTGCCAAATCTTATATTTCAACCA CAAAAGTCTAAAACTTTGTTTCCAATTCAGAGACCCATTTGCCGGAAGATACCATTTTCCGGCGAGGTTAGTGAGTTTCCGGCTATCAATGGCGGCGGTG GACAATGAAAAATCTGGGTCTGATGGCAAAGTTCGGAGCTTTTGCAATTTGTCATTTTGGCAAACAACTCATGCTTCTTCTTCTTCATCATCGTCTTTTA CTTCTTCAACATATTCTTCTATGCATAGTAGTGTTCATCAGCAAAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCAAAAACTACGGTTTC CTCCGTGGCTAAATCTCTTCTTCCTACAAGGAGAAGACTTCGTCTCGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGC GCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGGTGCGGTGTCTATATCTACTATTCCTTTTTTTCTAATTAATCTATGTTTCATTTA GAGTATTGACATATAACATTGGGAATTTTTATTAAAATACTTCCAAGATGTTGATAAATTTTGCTATAGTAACTAGAGCATGATAGGTCGTGTAATATAT TGAACAAGACACCAAGAATGTGTTAATCTAGTGGTGTAAGGCCCTACTAGATCCCCAAGGTCGAGAGTTTGATTCTTGGGAGTGACACTTGTTGGAGGGG CAACTACAAACCCGGAAAGAGATTAGTTCTTTGCCCAAAAAGGTAAAGGATACCCTTGATAGTACCAAAAAAAATGCTGAACAAGGCCAAATCTTCATAT TTGCATTTCACCACGTATTTGATAGGATTATGAATAATTCAGCTGTTTATTGAAATATCAATTTTACATAGCTTGCTATATTTATCCACTCTTAATGTTA CTGCTGATGGTGATGTTTTGTTTAGTTTCAAACAACTGCTCCCAAGAGTTGTTATATGCGCCCACCAGGTGGTGTTCTTGCACCTAGTGAAAGTATAATT GCAACCGTGTTTAAGTTTGTGGAGCCGCCAGAAAACAACGAGAAACCAATTGAGCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAG GTGAAATGGATTATGTACCAGAACTGTTTGATGAGCAAAGGGATCAAGTATCGGTGGAGCAAATTCTGCGGGTGGTTTTCCTGGACCCTGAACACTCTAA CCCTGCCATGGATAAGCTTAAACGGCAGTTGGCTGAGGCTGAGGCTGCACTGGAAGCAAGAAAGAAGCCCCCGGAGGAGACAGGTCCTCGAATAGCTGGG GAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCAAAGCAACAGGTTGAAGGGGTTCCATCAATGTAAAGTTTTTTGGTGTCTT GTTCTTAATGTTCTCCAGTTTCATGTTGAGAAAATGAATTCCTTGATCACCAATCTGGCAGATGTGGTCGAGTGACCCAGCAAAGTACTGTAATGAGATA TTGTGAAATATTTCTTTGTTCTATTTCAGTAGCATATTTGAGGTGTTATATGATATTGAATTAATACTGTGGCTGGTGGTATTTAATTGTACTTTTGTAT TAGCTCCTATAACTTGTTCATAGTTTTAGCTTGTTTGAAGCGAAATTGATAGTAACAGAACTGGTATTTTACCTTCATGTAACTTATAGTTGGGGTTGAA TTTGCCTAATATTTTATGGGAGTGGCTAGCCCCTTTGTTTTCTTGTTCACCTTTCTCTTCATCTTACAGTTATGCAGTAGTAAAATGTTTCCATGAACAA GAAAGATCCTTGATTAGTTACAAAAAGAAAAGTGTGATCAAGTTATTAGACTCTCC
• Tissue: pods
• Gene name: LI_gene_166918;
• Additional information: details;

Expression of Ll_transcript_293358

FPKM

• PAB: 3.1
• PNAB: 4.7
• PS1: 4.3
• PS2: 2.1
• PS3: 2.7
• PW1: 8.3
• PW2: 9.1
• PW3: 12

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293358

• Blastp: Vesicle-associated protein 4-2 from Arabidopsis with 82.39% of identity
• Blastx: Vesicle-associated protein 4-2 from Arabidopsis with 83.89% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AT4G21450)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448981.1)
• Pfam: MSP (Major sperm protein) domain (PF00635.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;