Id Trinity | TRINITY_DN49146_c2_g4_i1 |
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Name Transcript | Ll_transcript_293203 |
Sequence | CAATGTTGGATTTGTCCATATAGTGCGTGTCAGATATAAAAAAACGAGTCGTGCAATAAAAAAAGTTGGTTACTATAATCTGAAAATTTGGTGGTTGACA TCACACGATTCACGATTCACACGATTCACGATTCACGATTCTCTTCTCTCCCACCATGGCCTCTCATCTCTTCAACCTTTCTCTATCTTCTCCACCCAAA CTCTCCTTCAACTACTACACTCCTATTCCTCTCTCTCACTTCTTTTCCATTCCTTACTCCAAACGCTGTCGTTTCACTAACCGCAACTCTCTTCGCCGTC CACATTTCGCTGTCTCCAACTCCTCTCTAACTCATACTTCCTCCCCGCTTCTACTTGACGTCACTGGAATGATGTGCGGCGCGTGCGTTTCACGCGTCAA GAACATCTTATCCGCCGACGACCGAGTCGACTCGGTCGTCGTCAACATGTTGACCGAGACCGCCGCCGTCAAGCTGAAGCGACACGAGGACGAGGTGGGA GGCGTTGCGGAGGGGCTTGCTCGGAGATTGAGCGAGTGCGGGTTTCCGACGAAGAGAAGGGCGTCGGGTTTGGGAGTGGCGGAGAATGTGAAGAAGTGGA AGGAGTTGGTGAAGAAGAAAGAGGAACTCGTTGTTAAGAGCCGTAACCGCGTTGCTTTTGCTTGGACTTTGGTTGCGTTGTGCTGTGGATCTCACGCTTC TCATATTTTTCATTCTTTAGGGATTCACATTGCTCATGGGCCGATTTTGGAAATTCTTCATAGTTCATATTTCAAAGGTGGTTTAGCTTTGGGGGCTTTA TTGGGACCAGGACGAGATTTACTGTTGGATGGTCTAAATGCATTTAAGAAGGGATCGCCAAATATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCT TTGTCATCAGTTTGATTTCACTACTTAACCCCGGTCTGGCTTGGGATGCATCATTTTTTGATGAACCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGACG TTCTTTAGAGGAAAAAGCTAGGATTCAGGCATCAAGTGATATGAATGAACTTCTATCACTCATATCTACTCAGTCGAGACTTGTAATTACTTCATCAGAA GGTTCATCATCTAGTGACAATGTGCTTTCCTCTAACTCAATTTGCGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGACTCAGTTTTAGTGTTGCCTG GAGAAACTATTCCTATAGATGTAAGCCTTTCTGATTGTTAACAAAGTTGCTTTTATGTCCATTGCAATCTTTAAGGGATTAAAGTGCCTATTTTGAGTAT TTTACTGCTCAATTAATGGCATAATCTGCCATCCCTGGCCTATAACTTACATTGTCATAGAAAACAGTGATTCAAATCTTTATGTTTGAAACTTCTCTCT TCATGATTTTAGATGGGATATCTGGTTAAACTTAATGGGTTGAATGGTATTGCTTGCTAATGCTAGAAATTCCTGGTCAGGGAAGGATCGTATCAGGAAG AAGTGTTGTGGATGAATCCATGCTTACAGGAGAGTCACTTCCTGTATTTAAGGAGGCAGGCCTCACAGTTTCAGCTGGAACTATAAATTGGGTAAGGTTT TACAAAGGCTCGAAATAGATACTGGATTATATGGCATGCTGTCTCACTAATATTCACATGTGGAGCTACTGTGTGGCTTTTATTTTTCTACCTTTGATTG GGAGAGCAGTTGATAATCTATTGCATTGAGCAAACATATTTCTATTTCAGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCAAACACAATGAT ATCCAAGATAGTACGCATGGTTAGTATACCATTCTCTGATGGCTTAGTGGTGAGATGATATATAATGTTTAATGAGGTGATCAAAATTTTCAGCTTTTCC CCCAGTTAAGAATGTAGTTTTCTGTAATCATAATTGTTATTCTTTGTAGGACAATCTAGTGCTGAGCAATTTTTGTAATTGCTTAGCTTCATTGTTCATA TGGTATTTAGAATCATGCAGTCAGGGATGATGTATACATTTTTTATTGACATTTTTTGTTTGCATTACTGACATATCCACTGACTTGGGATATATGCTAA TTAAACATTGATACAGAAATTTTCTGCAATGTTGTTACAAACTAACTGCTTTATCTTGTAAAATTTAGGTTGAGGATGCTCAATCACGTGAAGCACCTGT ACAAAGGCTTGCGGATTCAATAGCAGGACCATTTGTATACAGTGTAATGACTCTATCAGCAGCAACATTTGCATTTTGGTACATACTTTTTTCCATTCAT ACTTTTTATTTGATGTGATTATGATTTGTGGCGCTGATCCTAGATGATGGGCTTTATTTGGCATAGTGATTATTATTATTATTATATATGACATATGTAC CATACACTTAAAAAAAGGGAGTTGTATCCTTTTGTGTTTCATGTCTATGCCAACAATTCATGCTTCGTACAATCTTGCAGTAAGATTTATAATTATCATG GACATTTAATTTTTCGAAGGAAAAGATTTTGTGTACAGTTCATCTTACCCATCTCCTTTGACAAGTTTGATGCATTTGTCTCCAGGTATTTTATTGGGTC GAACATATTTCCTGATGTTTTGCTCAATGATATTGCTGGCCCTGAAGGAAATCCTTTGCTTTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTTGTTTCT TGTCCCTGTGCACTGGGTCTTGCCACACCCACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAGAAAAGGACTTCTTATTAGAGGAGGGGATGTGCTCG AACGCTTGGCCAACGTAAACTATATTGCTCTGGACAAGACAGGAACCCTCACCAAAGGAAAACCGGTTGTCTCTGCTATAGGCTCTATTCATTATGAAGA GTCGGAAATTCTTCAGATTGCAGCTGCAGTGGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATTGTTAATAAAGCTGAATCATTAGAGTTGATTCTT CCACTTACAAGAGGACAGTTGGTTGAACCAGGTTTTGGAACCATGGCAGAAGTAGATGGGCGTTTGGTTGCGGTTGGATCTTTACAATGGGTCAATGAAC GCTTCCAGACAAGAGTGGACCCATCTGGTTTGATGAATTTGGAACATAGTTTGATGAATCATTCTTCAAATATGACATCTTCAAACTATTCGAAAACTGT TGTTTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACATTGTGCGCGAAGATGCGGAATCTACTGTAACAAGGCTTAAGCAG AAGGGGATTAAAATGATCCTCTTATCCGGAGACAGGGAAGAAGCAGTAGCAACTATAGCAGAGACGGTTGGAATTGAAAGTGATTTTGTCAAAGCTTCAC TGTCTCCACAGCAGAAATCTAAATTCATTTCATCTCTGAAAGCTGCTGGACATCGTGTTGCAATGGTAGGTGATGGGATAAATGACGCACCCTCTTTGGC TGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCCATTATACTTCTTGGGAACAAAGTTTCGCAAGTA TGTCATTTCTGAATTCCTTAATTTATTAATTTGATTTTCTGCATGTCGAGATTTTACTTTTATGCTTTCACCCTGCATCATTTCATGTATTATTCTTGAG TGATCCTTTTTCCTCCTGCATCTCGGTAAAACACTAGTTGTTTTTTTATTTTTTGACATTTTTTTCCAAGTGAGTAGAAGGACTTGTAGGATAGTTCATA GGAGAATAAACGGTATCTTGTTCTTTTTACAGTGAGCTTTGCTCTCTGCATACCCAATTCTCTTATGATGGAATTGACCCTCAAAAAATTGAAATTGCTG CTCAAGAGTATGGAAATGTGTTCTAATAAGTATATTCTGTTAGTACTAGCATATTTGGTACAAAATCCACTTTATTGTTCTCCGGTGTCTTCCTTTACTG ACTTTTTATTTGACAGATTGTTGATGCACTAGACCTTGCACAGACAACTATGGCAAAAGTGTACCAAAATTTGTCTTGGGCAGTGGCCTACAATGTTATT GCCATTCCCATTGCTGCTGGTGTATTACTTCCTCATTATGATTTTGCTATGACACCTTCACTTTCAGGTGAGCAACATTATATCACTCGTTTCTTTTTCA ATTTTCTTAGTAGCTAAGCAAATAAGGGTCTATTTTTATCTTGTAATTGCTGTCACTCTCATACAGTTTCTGCACCTACCATATTTTTTTCTAAAGACTG GTTCTTTTCTGTTTATGCCCTTGATTTTAATCACAGGAGGAATGATGGCTCTGAGCTCCATCTTTGTGGTGAGCAACTCACTGCTTCTACAACTTCATGG GTCTAAGACTTCCACAAAGGGCTCACTCTAGTCACATGTAATAAACATATCTTCTATCCATTACAGCATGGTACAGTGTAAGTTTTGTTAATTAACGGGG GTGGTGATTCTTTCTAATCAAGACAATAAGAGTATGATTTAGGCATTCATCAAATAAGCAGAATTAAGAATCACAAGCAGCAAGCTCCTATTTTGTTGTT ATTGTAATTAAAATTTGTGTATAGTTGTGACCAATATCTTGAGTAAGTCTGGTTTTGATGCCATGTTAGAATAGCTCAAGTCAAACTTAATTCAACATTG TTTGTCATATTTTCAATTAGTGTGCAACTATCTTTGTACTATATGAATGCATCAATAAAAGAAAGTTCCAACCATAGGCAGAGGGGGAAGAAATTAGTGA T BLAST |
Tissue | pods |
Gene name | LI_gene_166938; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_293203
Blastp | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 70.93% of identity |
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Blastx | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 70.93% of identity |
Eggnog | p-type ATPase(COG2217) |
Kegg | Link to kegg annotations (AT5G21930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437831.1) |
Pfam | E1-E2 ATPase (PF00122.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |