| Id Trinity | TRINITY_DN49146_c2_g4_i13 |
|---|---|
| Name Transcript | Ll_transcript_293225 |
| Sequence | CAATGTTGGATTTGTCCATATAGTGCGTGTCAGATATAAAAAAACGAGTCGTGCAATAAAAAAAGTTGGTTACTATAATCTGAAAATTTGGTGGTTGACA TCACACGATTCACGATTCACACGATTCACGATTCACGATTCTCTTCTCTCCCACCATGGCCTCTCATCTCTTCAACCTTTCTCTATCTTCTCCACCCAAA CTCTCCTTCAACTACTACACTCCTATTCCTCTCTCTCACTTCTTTTCCATTCCTTACTCCAAACGCTGTCGTTTCACTAACCGCAACTCTCTTCGCCGTC CACATTTCGCTGTCTCCAACTCCTCTCTAACTCATACTTCCTCCCCGCTTCTACTTGACGTCACTGGAATGATGTGCGGCGCGTGCGTTTCACGCGTCAA GAACATCTTATCCGCCGACGACCGAGTCGACTCGGTCGTCGTCAACATGTTGACCGAGACCGCCGCCGTCAAGCTGAAGCGACACGAGGACGAGGTGGGA GGCGTTGCGGAGGGGCTTGCTCGGAGATTGAGCGAGTGCGGGTTTCCGACGAAGAGAAGGGCGTCGGGTTTGGGAGTGGCGGAGAATGTGAAGAAGTGGA AGGAGTTGGTGAAGAAGAAAGAGGAACTCGTTGTTAAGAGCCGTAACCGCGTTGCTTTTGCTTGGACTTTGGTTGCGTTGTGCTGTGGATCTCACGCTTC TCATATTTTTCATTCTTTAGGGATTCACATTGCTCATGGGCCGATTTTGGAAATTCTTCATAGTTCATATTTCAAAGGTGGTTTAGCTTTGGGGGCTTTA TTGGGACCAGGACGAGATTTACTGTTGGATGGTCTAAATGCATTTAAGAAGGGATCGCCAAATATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCT TTGTCATCAGTTTGATTTCACTACTTAACCCCGGTCTGGCTTGGGATGCATCATTTTTTGATGAACCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGACG TTCTTTAGAGGAAAAAGCTAGGATTCAGGCATCAAGTGATATGAATGAACTTCTATCACTCATATCTACTCAGTCGAGACTTGTAATTACTTCATCAGAA GGTTCATCATCTAGTGACAATGTGCTTTCCTCTAACTCAATTTGCGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGACTCAGTTTTAGTGTTGCCTG GAGAAACTATTCCTATAGATGGAAGGATCGTATCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAGTCACTTCCTGTATTTAAGGAGGCAGG CCTCACAGTTTCAGCTGGAACTATAAATTGGGTAAGGTTTTACAAAGGCTCGAAATAGATACTGGATTATATGGCATGCTGTCTCACTAATATTCACATG TGGAGCTACTGTGTGGCTTTTATTTTTCTACCTTTGATTGGGAGAGCAGTTGATAATCTATTGCATTGAGCAAACATATTTCTATTTCAGGATGGTCCTT TAAGGATTGAAGCTTCTTCAACTGGCTCAAACACAATGATATCCAAGATAGTACGCATGGTTAGTATACCATTCTCTGATGGCTTAGTGGTGAGATGATA TATAATGTTTAATGAGGTGATCAAAATTTTCAGCTTTTCCCCCAGTTAAGAATGTAGTTTTCTGTAATCATAATTGTTATTCTTTGTAGGACAATCTAGT GCTGAGCAATTTTTGTAATTGCTTAGCTTCATTGTTCATATGGTATTTAGAATCATGCAGTCAGGGATGATGTATACATTTTTTATTGACATTTTTTGTT TGCATTACTGACATATCCACTGACTTGGGATATATGCTAATTAAACATTGATACAGAAATTTTCTGCAATGTTGTTACAAACTAACTGCTTTATCTTGTA AAATTTAGGTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCGGATTCAATAGCAGGACCATTTGTATACAGTGTAATGACTCTATCAGC AGCAACATTTGCATTTTGGTACATACTTTTTTCCATTCATACTTTTTATTTGATGTGATTATGATTTGTGGCGCTGATCCTAGATGATGGGCTTTATTTG GCATAGTGATTATTATTATTATTATATATGACATATGTACCATACACTTAAAAAAAGGGAGTTGTATCCTTTTGTGTTTCATGTCTATGCCAACAATTCA TGCTTCGTACAATCTTGCAGTAAGATTTATAATTATCATGGACATTTAATTTTTCGAAGGAAAAGATTTTGTGTACAGTTCATCTTACCCATCTCCTTTG ACAAGTTTGATGCATTTGTCTCCAGGTATTTTATTGGGTCGAACATATTTCCTGATGTTTTGCTCAATGATATTGCTGGCCCTGAAGGAAATCCTTTGCT TTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTGAGTGATTTTAAGTTTATGATTAAAACTACTTGCCTGTCCTTATTGGCTTTTCTTCCCCTCATCTCC CGAGCATTAACCACTCCCTTTTTTCTGCCTTTCCGCTTCTGTTGTTAGGACATGCTGTATAATCTATAATTAAAACTGTGTCCTTTATCTAAAAAAACTT CAGTCGTTATCTTTATCCATTTCAGAGAGCCTTCAAACTTAGTGTCTTCACATTGTCAAAGACGTGGTGCTAAAAACTAGTATTTGTAATTCATCTGTCT GGAACCGATTGTATCGTACAATTCCATGAGTGTTAATGAATAGAGGAAGAGAAAAGTAGGGTCTAGGAGTTGGCATTGTTCCAGGATAAGGGAATTTTTC ACACAAGACAGCATTGAATGTTGTGTTTTTAATTTACTTTTCACTTATTTTTTTTACAAATAGTCTTCCTCCCTCTGCAGGTTGTTTCTTGTCCCTGTGC ACTGGGTCTTGCCACACCCACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAGAAAAGGACTTCTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_166938; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_293225
| Blastp | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 71.35% of identity |
|---|---|
| Blastx | Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 66.67% of identity |
| Eggnog | p-type ATPase(COG2217) |
| Kegg | Link to kegg annotations (AT5G21930) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437831.1) |
| Pfam | Heavy-metal-associated domain (PF00403.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |