Ll_transcript_293214

• Id Trinity: TRINITY_DN49146_c2_g4_i9
• Name Transcript: Ll_transcript_293214
• Sequence: CAATGTTGGATTTGTCCATATAGTGCGTGTCAGATATAAAAAAACGAGTCGTGCAATAAAAAAAGTTGGTTACTATAATCTGAAAATTTGGTGGTTGACA TCACACGATTCACGATTCACACGATTCACGATTCACGATTCTCTTCTCTCCCACCATGGCCTCTCATCTCTTCAACCTTTCTCTATCTTCTCCACCCAAA CTCTCCTTCAACTACTACACTCCTATTCCTCTCTCTCACTTCTTTTCCATTCCTTACTCCAAACGCTGTCGTTTCACTAACCGCAACTCTCTTCGCCGTC CACATTTCGCTGTCTCCAACTCCTCTCTAACTCATACTTCCTCCCCGCTTCTACTTGACGTCACTGGAATGATGTGCGGCGCGTGCGTTTCACGCGTCAA GAACATCTTATCCGCCGACGACCGAGTCGACTCGGTCGTCGTCAACATGTTGACCGAGACCGCCGCCGTCAAGCTGAAGCGACACGAGGACGAGGTGGGA GGCGTTGCGGAGGGGCTTGCTCGGAGATTGAGCGAGTGCGGGTTTCCGACGAAGAGAAGGGCGTCGGGTTTGGGAGTGGCGGAGAATGTGAAGAAGTGGA AGGAGTTGGTGAAGAAGAAAGAGGAACTCGTTGTTAAGAGCCGTAACCGCGTTGCTTTTGCTTGGACTTTGGTTGCGTTGTGCTGTGGATCTCACGCTTC TCATATTTTTCATTCTTTAGGGATTCACATTGCTCATGGGCCGATTTTGGAAATTCTTCATAGTTCATATTTCAAAGGTGGTTTAGCTTTGGGGGCTTTA TTGGGACCAGGACGAGATTTACTGTTGGATGGTCTAAATGCATTTAAGAAGGGATCGCCAAATATGAACTCTCTTGTGGGATTTGGTTCTATAGCTGCCT TTGTCATCAGTTTGATTTCACTACTTAACCCCGGTCTGGCTTGGGATGCATCATTTTTTGATGAACCGGTCATGCTTCTTGGTTTTGTGCTTCTAGGACG TTCTTTAGAGGAAAAAGCTAGGATTCAGGCATCAAGTGATATGAATGAACTTCTATCACTCATATCTACTCAGTCGAGACTTGTAATTACTTCATCAGAA GGTTCATCATCTAGTGACAATGTGCTTTCCTCTAACTCAATTTGCGTTGAAGTCCCAACTGATGATATTCGAGTAGGTGACTCAGTTTTAGTGTTGCCTG GAGAAACTATTCCTATAGATGGAAGGATCGTATCAGGAAGAAGTGTTGTGGATGAATCCATGCTTACAGGAGAGTCACTTCCTGTATTTAAGGAGGCAGG CCTCACAGTTTCAGCTGGAACTATAAATTGGGATGGTCCTTTAAGGATTGAAGCTTCTTCAACTGGCTCAAACACAATGATATCCAAGATAGTACGCATG GTTGAGGATGCTCAATCACGTGAAGCACCTGTACAAAGGCTTGCGGATTCAATAGCAGGACCATTTGTATACAGTGTAATGACTCTATCAGCAGCAACAT TTGCATTTTGGTATTTTATTGGGTCGAACATATTTCCTGATGTTTTGCTCAATGATATTGCTGGCCCTGAAGGAAATCCTTTGCTTTTGAGTTTAAAACT CTCTGTAGATGTTTTGGTTGTTTCTTGTCCCTGTGCACTGGGTCTTGCCACACCCACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAGAAAAGGACTT CTTATTAGAGGAGGGGATGTGCTCGAACGCTTGGCCAACGTAAACTATATTGCTCTGGACAAGACAGGAACCCTCACCAAAGGAAAACCGGTTGTCTCTG CTATAGGCTCTATTCATTATGAAGAGTCGGAAATTCTTCAGATTGCAGCTGCAGTGGAGAAAACAGCATCTCATCCAATAGCAAAGGCTATTGTTAATAA AGCTGAATCATTAGAGTTGATTCTTCCACTTACAAGAGGACAGTTGGTTGAACCAGGTTTTGGAACCATGGCAGAAGTAGATGGGCGTTTGGTTGCGGTT GGATCTTTACAATGGGTCAATGAACGCTTCCAGACAAGAGTGGACCCATCTGGTTTGATGAATTTGGAACATAGTTTGATGAATCATTCTTCAAATATGA CATCTTCAAACTATTCGAAAACTGTTGTTTATGTTGGACGTGAAGGAGAAGGCATCATTGGTGCTATTGCCATATCTGACATTGTGCGCGAAGATGCGGA ATCTACTGTAACAAGGCTTAAGCAGAAGGGGATTAAAATGATCCTCTTATCCGGAGACAGGGAAGAAGCAGTAGCAACTATAGCAGAGACGGTTGGAATT GAAAGTGATTTTGTCAAAGCTTCACTGTCTCCACAGCAGAAATCTAAATTCATTTCATCTCTGAAAGCTGCTGGACATCGTGTTGCAATGGTAGGTGATG GGATAAATGACGCACCCTCTTTGGCTGTAGCTGATGTTGGGATTGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCGGATGCAGCATCCATTATACT TCTTGGGAACAAAGTTTCGCAAATTGTTGATGCACTAGACCTTGCACAGACAACTATGGCAAAAGTGTACCAAAATTTGTCTTGGGCAGTGGCCTACAAT GTTATTGCCATTCCCATTGCTGCTGGTGTATTACTTCCTCATTATGATTTTGCTATGACACCTTCACTTTCAGGAGGAATGATGGCTCTGAGCTCCATCT TTGTGGTGAGCAACTCACTGCTTCTACAACTTCATGGGTCTAAGACTTCCACAAAGGGCTCACTCTAGTCACATGTAATAAACATATCTTCTATCCATTA CAGCATGGTACAGTGTAAGTTTTGTTAATTAACGGGGGTGGTGATTCTTTCTAATCAAGACAATAAGAGTATGATTTAGGCATTCATCAAATAAGCAGAA TTAAGAATCACAAGCAGCAAGCTCCTATTTTGTTGTTATTGTAATTAAAATTTGTGTATAGTTGTGACCAATATCTTGAGTAAGTCTGGTTTTGATGCCA TGTTAGAATAGCTCAAGTCAAACTTAATTCAACATTGTTTGTCATATTTTCAATTAGTGTGCAACTATCTTTGTACTATATGAATGCATCAATAAAAGAA AGTTCCAACCATAGGCAGAGGGGGAAGAAATTAGTGATTGATTCAATTCAATAGTAAAATGCTCTATATCTAACATTATCAAAGCTAAAATGTAGCCAGG AGAATGTTTACATTATTGGTTCATATAGTACTTGCCCACAACTTTACTCACAAGGGAAACCAGTATACTATAGCCTAAATAACTACCATATATATACCCA CTAACCATGTAATAAACTTACACAAAAAACAAATCAAATCTTGATACATATATACTCTATACACTAATTTTAAAACAATGAATTAACCAAGTGATGCAAG CTTTGCTAGAGTTCCAACTGCTAAAGAGTTAACATAAGTGCATGGTTCAGTATATGATGATGTAGTGCGTTCGTTAACA
• Tissue: pods
• Gene name: LI_gene_166938;
• Additional information: details;

Expression of Ll_transcript_293214

FPKM

• PAB: 36.1
• PNAB: 13.8
• PS1: 11.5
• PS2: 6.2
• PS3: 9.3
• PW1: 36.1
• PW2: 18.6
• PW3: 14.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_293214

• Blastp: Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 70.56% of identity
• Blastx: Copper-transporting ATPase PAA2, chloroplastic from Arabidopsis with 75.44% of identity
• Eggnog: p-type ATPase(COG2217)
• Kegg: Link to kegg annotations (AT5G21930)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437831.1)
• Pfam: Heavy-metal-associated domain (PF00403.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;