Ll_transcript_291539

• Id Trinity: TRINITY_DN49148_c1_g1_i13
• Name Transcript: Ll_transcript_291539
• Sequence: TGATTTAATTAATCCAATATCATTTTCCTCCTCCTCCTTCTTCATTTTCTTCTCATTACATTTTTATTTCTTCATTTTCTATTTGAGATATGGGGATATA CCTTAGCACCCCGAAAACAGAGAAAGCTTCTGAAGATGGTGAGAATGATAAGCTTCGATTCGGTTTGTCTTCCATGCAGGGTTGGCGTTCTTCAATGGAA GATGCTCATGCAGCTCATCCATATTTGGACGAGACTACATCTTTCTTTGGTGTTTTTGATGGCCATGGAGGCAAAGGAGTTTCAAAATTCTGTGCCAAGT ATCTACACCGGCAAGTGCTTAAGCATGAAGCTTACGAAGTGGGAGATCTTGGCACATCTTTACAGAAATCTTTCCTCAGAATGGATGAGATGATGCGTGG ACAAAGAGGGTGGAGGGAATTAGCAGTCTTGGGAGATAGTATAGAAAAGTTGTCTGGCATACTAGAGAGCTTTATATGGTCTCCCAAGGGTGGTGAAGCC AATGACCATGTTGATGATTGGGCTTTTGAGGAGGGACCCCATTCTAATTTTAGTGGACCAAACTGTGGAAGCACAGCTTGTGTGGCTGTCATTCGAGGAA ATAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTATTGTCAAGGAAGGGCCAGGCACGTAATTTGTCAAAAGATCACAAGCCTAACCTTGTGGC TGAGAAAGACAGGATTCTAAAAGCTGGTGGATTCATCCATGTTGGACGGGTCAATGGAAGTTTAAACTTGGCTAGGGCAATTGGAGACATGGAATTCAAA CAGAACAAGTTTCTGCCTGTTGAAAAGCAGATTGTGACTGCAGATCCAGACATAACCTCAATTGAGCTTTGCGATGATGACGAGTTTCTTGTACTAGCTT GTGATGGGATATGGTAGCTTTCTTTGTTACTTTTATTTTCTTCTAGAAATATTGTTGGTGTTTACAAATCTGTATAGATGGCAAGATTCCTTTTTTTATA TTTTGTAGTTCTTGCTCTATTTAATTCTTTACTATTATATAACCTGTTTGAGGTTGAGTCTCGACGCAACAATAAGATTGCTTGTTGTGTGACCTAGAGG TCAAGGGTTCAAATCCTGAAAACAGACTTTTCACTACGAGGTTCAAATCCAAACCCTACTAGGTGGGAGCCTCGTGTAATGGGTCGCCCTTTTTTATTAT ATAACTTGGTTATTTGTGTAGGGATTGCATGTCAAGTCAACAGCTTGTGGATTTTATACATAGACAGTTAAAAACAGAGAATAAACTTTCTGCGGTCTGT GAGAAAGTATTTGATAGTTGCTTGGCACCAGCAGTTGGTGGTGAGGGGTGTGATAACATGACCATGATTTTGATTCAGTTCAAGGATCCTTCAAATCCCA GCGCTCCCGTCACAAACCAGCCTCAGTCATCCACCGAATCGTCCAAAGCTGATACGGGTGAAGAGAAAGCAGAATAAAACTGAGAAAGAAATCGGACAAC ATCTGAAGCATCGATGGGCAGGGTTCATGGATACTGTTCTGTATCCAGATTTCAGGATGTTGATTAGGGGATTGTAAATTTGTGAATGAACATGATATTG ACTTTGTACATAAGTGTGTTTAGCATATGAAAGGAAAACAATGGTTCAACAAGCATACTAGCACACAGTTACATGGATGGGTAAAATCACTGTGCAAACT TACCATTGCCAATGGTAGCTACCTGAAATGTTTTCTGGAATATGGGGTCATGTTCAGTACCCATAATCTGTACAAGTTTGGTGATGATTCAGTTTTATGT ATGGAATTTACAGGTAACTCTTTTTCTATAGACCCCTATAGTTGATTGATTGATGCACTTATAATTACATTATTGTTAATTTTCTATATGGCAGATGATA CTGGTTAGTTTCTTGTCTGGTTCTATAGATGTTAGTTTATATGCTAATAACATTTTGAAAATGAGGAAAGGATCTTGATAGAATCTCAAGTGACTTCATT ATTATTACTGTTGTGG
• Tissue: pods
• Gene name: LI_gene_166947;
• Additional information: details;

Expression of Ll_transcript_291539

FPKM

• PAB: 23.6
• PNAB: 6.5
• PS1: 6.3
• PS2: 5.8
• PS3: 6.5
• PW1: 8.3
• PW2: 15.3
• PW3: 15.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291539

• Blastp: Probable protein phosphatase 2C 60 from Arabidopsis with 77.45% of identity
• Blastx: Probable protein phosphatase 2C 60 from Arabidopsis with 77.45% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT4G31860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456350.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;