Ll_transcript_291510

• Id Trinity: TRINITY_DN49150_c1_g2_i2
• Name Transcript: Ll_transcript_291510
• Sequence: GGAAGCCATAGGGTATGGTATTGCCGACAAAATCATTGATTCAAGGGATGCTACATTTGATAAGCGGAATTATGATGAAATGGTTGGTCAATCAAGAGCA ACAAGGAGACAAGCTGGTGGCAATCCTCAAGTTGCTCCAACAGGATTTAGGTAATCATACAAAGCATGGATTCACTTATTGTGCTTCAAATCCAATGCCT TAAAAGGGTCTTGTTGTCAGGCATCAATCTTGTTCTTATATAAACAAGGCCAAATGGAATAAAATCCTGATAAGTGTATAAGCTTTGTACCTTGGTTCTC GGCGTAGTTTGTAGTATACTTAAATTGAATTACTTATGCTTAGTTTCAACAACTAAAGAAAATGACCAGGGCTCAGGGATTATTTTCTTTTGTTGTATAT ACTGAACTGTTACCGATACAACAGACTTCATAAGATCACTGCATTGTCTACAACACTCCTTTGTTTCATTTTTTCCTTTATGACATTTTCATTTTCTCTA AAGTACCTTCGAGCACACACTCCCCCCACATTTTCCGATTTCATTGCTCATTACCTTGCATCCAACCATGAGTAATTTTGTTGTAGTTATCATTATTTGC TTTTTTTATTTCTATTTTATTTATTGGCAATGCTATATTTGTTGAGATTCGATAAAGTTTTATGTTGGTTATTGACTCCTAACACAACATTTATTTTTTA CTTAGACTTCACCCTAGTTATGTATAGCGCCATTTTACCCTTGTAGTTGACCTGTCATATGATCGGAAAAGGTTTAGTTCTGCGTTGAAAGCCACATTTA CATTGATTGGATTCAAGCTAGTTATTCAATCACAGATATGTTGGCTTCAATGGCGGAGGCTGCGTCTTTCCATAATGCTGACTCGGAAATTGAGGTTGAT GCACAACACAGGTGATTAGTCATCTTTGGCTTATCAATTTCAGTTTACTTAACAACAGAACTATATATTCACTGAATAGAAAAGCCATTTCTTACTGCAG TTTGTATCTATAAATTATATATACGAGCATTAAGTATACCTAGGCTAAGAAACACAACCGAAATCAGTGTATCCTCCATGGATTCTATTATCTATTTTTT ACGCTGAATCACTTTGTCCGAACTGCGTTGTTTGTTATGCATTTGAAATGTGGCTGTTTGAATCTAGCATATCAGTTGTTTGATCAATTGCCTGAGAGAG AGATATACATTTTGCTACAATGACACGATTGGAGGACTTGCAATTCATGGATGATTATGGTTACCATGTTTGCGTGTTCTCATGTTGGGTTGGTTGAGGG TTTGTAAATTTTAGAGTCAATCAAGGAGGTCCATGCTATGGAATCAAAACTTGATCCTTATGGAATGCGTAATCGATCTTGGTCGAGCCGCCGGGAAATT AAAAGAGGCAGAGATGAGATCACAAGACATGCGTATGAAACCGAAAGTAGTTTTAAGAAGGTCTTTACTAGGAGCAGCAAGACTTCCTTCATGGCAATGT AAAGATATGAGAAACTTATCCATTTTATGAATAAATATATTTGAAGATTGGGGAGATAAATGCAAGAGTACAAAAATATGGTTACAAGCCAAGAACATGA GATGTATTGTATTCTCTAATTTATAAGTAAGCAGATGAATACATGAGATGTATTGTAGTTAAGATGCATTTCAACACAATTCGCTCCAAATGGGAATTCA CTAGAACTATAATCAATCGAAATGAATCTTAATTTCAGCGCTATAGAGATGTTTTTATTTATTTATCTCTTATTCATGAAA
• Tissue: pods
• Gene name: LI_gene_166972;
• Additional information: -

Expression of Ll_transcript_291510

FPKM

• PAB: 21.4
• PNAB: 5.1
• PS1: 6.4
• PS2: 5
• PS3: 6.4
• PW1: 6.5
• PW2: 7.2
• PW3: 6.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291510

• Blastp: -
• Blastx: Pentatricopeptide repeat-containing protein At5g43790 from Arabidopsis with 35.14% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G43790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_012574292.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;