| Id Trinity | TRINITY_DN49151_c5_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_292751 |
| Sequence | ATTTTAAGAACTTATCAAATAGGGGTCACATTTTTTATCGGTTGTGGATATTAAGTCCTTCTCTTTTTAACATTTAGAATGTTGTAATTATGATACTTTT GCTCCCAAATTTAGTGTCCCCTGTAAACTTTTAAGGTTTGTTTGGGACATTTTTGTAGGAGAAGGCTTTGGAGCCGTCTCAGCACTATATTTCATGCCTC CTTCCTCCTTCAAAACTCAAATCGCAAACAAAGCTAAAGGGGTATAATGAAAGGTTATATATGCCTAGTTGCCCACTAATAAAACGAGAAGTAAATTACA TAGATATGAAGAATAGATAGCTTTTACTCTTCTTGTTTCAAATTGTAATGGAGCCTTCTTCTCATCCACCAATAATCAGAAACGTTTATTTGCATATAAA ATTTAAGTTAATTGGACAACCTGCATAAATCACTAGTGATTCTCATTTTTTTATGTTACATTGCAAACAGATTTGCTATGTGTTGTACCCTGGAGATGAA TCCTTAGAAGGAAAGATACTGCGATTGAAGCAACAATATACATTATGCTCTGCATCTCTCCAGGATATTTTTGCACGCTTTGAAAAGAGATCAGGAAATA CAGTAAACTGGGACACTTTTCCAGAAAAAGTGGTGGTTCAAATGAATGATACTCACCCAACACTCTGCATTCCTGAACTGATTAGGATATTGATAGATGG AAAGGGTTTAAGCTGGGAAAAAGCTTGGGATATTACCAAAAGAACGGTTGCTTACACAAACCACACAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTG ACACTTCTGCAGGATTTGCTTCCTCGACATGTGGAGATAATAAGAAGAATAGATGAAGAGTTCATACTTGAAATTATTTCCAAGTATGGGACACATGATC TTGACTTGATACAACAAAAGCTTAGAAAGATGAGAATACTAGAAAATATTGAGTTACCCAACTCAGTGATAGAGCTGATTAATAATTTAAAGAAGGCTCC TGCCTCTGAGGATGTTAAGGAAATTGGTCTTAATGATAATGATATAAAGGCAACAGAAGAGAAAGAAGATGATGAAGTCGGGGAAGAGGAACAACAACAA GAAGAAGAAGAAGATAACAATTCTACTAGGGAGGATACTGATAAGAAAACGGAGTGGACATTCAAAGTTGATCCGAATTTGCCAAGGATGGTTCGCATGG CTAATCTTTGTGTTGTTGGTGGACTTTCTGTGAATGGAGTAGCTGAGATTCATAGTGAGATTGTGAAAGATGAAGTTTTCAATGAATTTTACAAGTTGTG GCCAGAGAAATTCCAGAATAAAACAAATGGGGTGACCCCTAGAAGATGGATCCGTTTTTGTAATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGA ACAGATGATTGGGTAACTGATCTTCAGAAGTTGGCTGTACTTCGCAAGTTTGCAGATAATGAGGATCTACAATTGGAGTGGACAGCATCCAAAAAAAGAA ACAAGATTAAGGTTGCATCATTTCTCAAAGAGAAAACTGGTTATGTTGTCAGTCCAAATGCAATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAA GCGGCAATTACTGAATATTTTGGGAATTGTTTATCGCTACAAAAAGATGAAAGAATTGAGTGCCGAAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGT ATTTTCGGAGGAAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCGCAGATGTAGGAGCTACAGTCAATCATGATCCAGAAATTG GAGATCTTTTGAAGGTTGTATTTGTCCCTGATTACAATGTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_166990; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292751
| Blastp | Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic from Ipomoea with 70.5% of identity |
|---|---|
| Blastx | Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 71.52% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445910.1) |
| Pfam | Carbohydrate phosphorylase (PF00343.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |