Ll_transcript_292766

• Id Trinity: TRINITY_DN49151_c5_g1_i9
• Name Transcript: Ll_transcript_292766
• Sequence: GTTTCCTTCATTCCTTGTATCTTGATGGAATTGATGGTAAAACTTCATTAGAAGGAGTCTTTAGGTGTTTAATCATTTAATTAACCTAGCAACTTCTTTA TGCAATATAGCAGTGTCCTCTTGAAATTAAATGGATGCTCTACTCTAATCTTCTCCCAGTCTTCATGTTCTATTGAGCTAAAACATCCAAATTTGTAAGT AAAGTCTAGCTTAACAATTGCAGGCACTTTGGATAATTTTGTAGCAGATTCTGCATCTATTGCTTCTAGCATCAAATATCATGCTGAGTTCAAGACATCC TTTTCTCCAGAGAAGTTTGAGCTTGGTAAGGCATACCTTGCAACTGCACAAAGTGTCTGTGATTCACTCATCATAAATTGGAATGCAACATATGACTATT ATGAGAAGATTAATGTTAAGCAAGCTTATTATATGTCTATGGAGTATCTACAGGGCAGGGCATTGCTAAATGCAATTGGTAATTTACAACTCTCGGGTCC TTATGCTGAGGCTCTCAGAAAGCTGGGTCAAAATTTAGAAGATGTGGCTAATCAGGAACCAGATGCTGCCCTTGGGAATGGTGGATTAGGTAGACTTGCT TCTTGTTTTTTGGACTCATTGGCAACACTTAATTACCCTGCATGGGGATATGGACTTAGATACAAGTATGGTTTATTCAAACAGCTTATAACAAAGGATG GTCAGGAGGAAGAAGCTGAAAGCTGGCTTGAGATGGGAAATCCTTGGGAAATTCAGAGAAATGATGTATCTTATCCAGTTAAGTTCTATGGAGAAGTTAT TTCAGGGCCAAATGGAACTAAACAGTGGATTGGAGGAGAAAATATATCAGCTGTTGCTTATGATGTTCCAATACCTGGATACAAAACTAGAACAACTATT AACCTGAGATTGTGGTCCATTAAAGTTTCACCAGCACAATTTGATTTACAAGCTTTCAATACGGGAGATCATGCCAAAGCATATGCTGCCATGAACAATG CAGAGAAAATTTGCTATGTGTTGTACCCTGGAGATGAATCCTTAGAAGGAAAGATACTGCGATTGAAGCAACAATATACATTATGCTCTGCATCTCTCCA GGATATTTTTGCACGCTTTGAAAAGAGATCAGGAAATACAGTAAACTGGGACACTTTTCCAGAAAAAGTGGTGGTTCAAATGAATGATACTCACCCAACA CTCTGCATTCCTGAACTGATTAGGATATTGATAGATGGAAAGGGTTTAAGCTGGGAAAAAGCTTGGGATATTACCAAAAGAACGGTTGCTTACACAAACC ACACAGTTCTGCCGGAAGCGCTAGAGAAATGGAGCTTGACACTTCTGCAGGATTTGCTTCCTCGACATGTGGAGATAATAAGAAGAATAGATGAAGAGTT CATACTTGAAATTATTTCCAAGTATGGGACACATGATCTTGACTTGATACAACAAAAGCTTAGAAAGATGAGAATACTAGAAAATATTGAGTTACCCAAC TCAGTGATAGAGCTGATTAATAATTTAAAGAAGGCTCCTGCCTCTGAGGATGTTAAGGAAATTGGTCTTAATGATAATGATATAAAGGCAACAGAAGAGA AAGAAGATGATGAAGTCGGGGAAGAGGAACAACAACAAGAAGAAGAAGAAGATAACAATTCTACTAGGGAGGATACTGATAAGAAAACGGAGTGGACATT CAAAGTTGATCCGAATTTGCCAAGGATGGTTCGCATGGCTAATCTTTGTGTTGTTGGTGGACTTTCTGTGAATGGAGTAGCTGAGATTCATAGTGAGATT GTGAAAGATGAAGTTTTCAATGAATTTTACAAGTTGTGGCCAGAGAAATTCCAGAATAAAACAAATGGGGTGACCCCTAGAAGATGGATCCGTTTTTGTA ATCCTGATCTTAGTAACATCATAACCAAGTGGATTGGAACAGATGATTGGGTAACTGATCTTCAGAAGTTGGCTGTACTTCGCAAGTTTGCAGATAATGA GGATCTACAATTGGAGTGGACAGCATCCAAAAAAAGAAACAAGATTAAGGTTGCATCATTTCTCAAAGAGAAAACTGGTTATGTTGTCAGTCCAAATGCA ATGTTTGATGTACAGGTGAAGCGAATTCATGAATATAAGCGGCAATTACTGAATATTTTGGGAATTGTTTATCGCTACAAAAAGATGAAAGAATTGAGTG CCGAAGAAAGAAATCAAAAGTTTGTTCCTCGGGTTTGTATTTTCGGAGGAAAAGCATTTGCAACATATGTTCAAGCCAAGAGGATTGTAAAATTCATCGC AGATGTAGGAGCTACAGTCAATCATGATCCAGAAATTGGAGATCTTTTGAAGGTTGTATTTGTCCCTGATTACAATGTCAGTGTTGCTGAAGTGCTGATT CCTGGCAGTGAGTTGTCCCAGCACATTAGCACTGCTGGAATGGAGGCTAGTGGAACAAGCAACATGAAATTTGCAATGAATGGGTGTGTACTTATAGGAA CTCTTGATGGTGCTAATGTTGAAATAAGAGAAGAGGTTGGAGAAGATAACTTCTTTCTTTTTGGTGCACGAGCTAACGAGATCGCTGGGCTGCGGAAAGA AAGAGCTGAGGGAAAGTTTGTATCAGACCCAAGGTTTGAAGAAGTAAAGACATATGTTAGAAGTGGTGTTTTTGGCCCCTACAACTATGAAGAATTGATG GGATCATTGGAAGGAAATGAAGGGTATGGTCGTGCCGATTATTTCCTTGTTGGCAAGGACTTTCCTAACTACTTGGAGTCCCAAGAAGCAGTTGATCAGG CATATCGTGATCAAAAGAGATGGACAAGAATGTCAATTTTGAACACAGCTGGTTCATACAAATTCAGTAGTGACCGGACTATTCATGAATATGCTAGAGA CATATGGAAAATTGAACCTGTTGTCTTACCTTGAAAAGTTACATGTTGAGTTTTTTAGCATATTCAGCTTGTTCCTTATCTCAGAATTAAGTTCAGAAGG GCTTGAAAACTGAAGAAGAGGTTAAGTTCACTTGAATAGCCATGCAAAGAATATGTGAGCTTTTGTTGCCCCGGGAGAGTAAAGCTTATCTTCATAGCAT TTTGTAATACATTCCCATTCTAAACTTTTCAATCATATTGAAATTAAATTAAATTTCAATCTTCAATTTAAGACACATGGAATGATATATTTTAACTCTG TGGAACAATAGATTTTCCCCAAGCATAGAAATGCTCATAAGGATTTAGGGAGTCATGCAGGATCAAGTAGAATTGTTTATCACTTTTCAACCAATATTTT TCTCAGAAAAA
• Tissue: pods
• Gene name: LI_gene_166990;
• Additional information: details;

Expression of Ll_transcript_292766

FPKM

• PAB: 0.1
• PNAB: 1.6
• PS1: 0.1
• PS2: 0.4
• PS3: 1.3
• PW1: 1.5
• PW2: 1.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292766

• Blastp: Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 76.27% of identity
• Blastx: Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic from Solanum with 77.34% of identity
• Eggnog: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity)(COG0058)
• Kegg: Link to kegg annotations (102603391)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445910.1)
• Pfam: Carbohydrate phosphorylase (PF00343.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;