Id Trinity | TRINITY_DN49160_c0_g1_i1 |
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Name Transcript | Ll_transcript_290899 |
Sequence | CCCACGCCAAATTGTTCATTCTTCGGCTATCAGATCGAAATAAGTTTCAGATAGAGATGTTATAGGGAGCAAGAAATTTGTCTCTGACATGGTTGGTCAT GGTCAAGAAACAATTATATGTGCGGGTAGTGACGTGTGTCTGAAGAAGAAAGAGCTTCTTTCTAGTGCTATGAAGAGAACAAGTGAATGGTATGATTATA TTCTTATGGAACTAATGCTTTGGTGGTTACTGGTTTTTATGTTGAATGTACTTAACCTGCTTCTATAGTGTGTAACTGCACGAGTTTAATTAATTAATTA CAGGATATCATCTCAGGAGATTCCTAGTGATATCAATGTTCAGATTGGAGAAGCTACCTTTTCGTTGCATAAGTTTCCGTTAGTCTCCAAGTGTGGATAC ATTAGAAAACTCGTGTCAGAATCTAATGATGCTGATGTTTCGTTCGTCGAACTCTCTGATGTTCCTGGTGGAGCAGAAGCATTTGAGTTGGCAGCAAAAT TCTGTTATGGGATAAACTTCGAAATAAACGTTGAAAACATTGCGATGCTTCGGTGCGTGGCAGAGTATCTGGAGATGACAGAGGATTATTCAGTTGGAAA CTTGGTGGGAAGGGCTGATTCTTACCTGAATGAAGTGGCACTCAAGACAATAGCAGGAGCAGTTTCTATATTACACATGTCAGAGAACCTTCTTCCAATA GCAGAGAGAACAAAAGTGGTGAGCAGATGCATAGATGCTATTGCTTATATATCATGGAAGGAAAGCCAATTTTGTACATCTTCAAGAAGTGACAATGGCT CGGAAGAAGTAATGTCTTCAATAGCATCTCACCAGAGGCCAGTAGTTGAATGGTGGGCTGAAGATCTTACAGTTCTCAGAATTGACATTTTTCAAAGAGT TCTAATTGCAATGATGGCAAGAGGATTTAAACAGTATGCTATTGGCCCCATTCTAATGCTCTATGCACAGAAAGCGCTACGAGGTTTGGACATATTTGGA AATGGAAGAAAGAAGGTTGAGCTACGACAAGAGCATGAAAAGAGGGTTGTTTTAGAGACACTAGTGAGTCTTTTGCCAAGGGAGAGTAATGCAATGTCAG TAAGCTTTCTTTCTATGCTGCTTCGGGCATCAATATATGTTGAGACAACAGTTGCTTGCAGGCTTGATTTGGAGAAGAGAATGGCCATGCAGTTAGGACA GGCTGTTTTAGATGATCTTCTTATTCCTTCTTATTCATTTACCGGGGATACATTGTTTGATGTGGATACAGTTCAGAGGATCATGACTAACTACTTAGAA TCTGAATTGGGAAACCATTCAGTTTATAGTGCAGATGATGAATATTTTTCTCCCCCACAGAGTGATATGGATCGAGTTGGAAAGCTAATCGAAAACTACC TTGCTGAAATAGCAACCGACAGAAATTTACCTGTTCCAAAGTTCATCAGTATGTCTGAATTAATTCCTGAGCAATCCAGGCCAACAGATGATGGCATGTA TAGAGCAATAGATATCTATCTTAAGGCTCATCCTGCTCTAAGTGACATGGAGAGAAAGAAAGTTTGCAGCATAATGGACTGTCAGAAGTTATCGCGAGAA GCATGTGCCCATGCCGCTCAAAATGACAGGCTCCCCGTCCAAATTGTGGTTCAGGTTCTCTATTATGAGCAGCAACGGCTTCGCAATGCCATGAATGGTA ATGACGGGGAATCTCCTTCCTCTCATGGCAAACTGAATGTATACTCCACTGATCCTAATCCAGTTTCAAATGATCTCTCCAACTTAAGAAGAGAAAATCA AGACCTGAAATTAGAGCTAGTGAAATTGAAAATGAAACTGAAGGAGATTGAGAATGCTACACTCAAAGCAGGAGTTAACAATCCTGTAGTAAATGCTTCT CCTTCTGCCAATAAGCCTCCTCTGCCGCGAAAATCTTTCATAAGCTCTGTGTCCAAAAAACTAGGCCGACTTTCTCCTTTTCAACGTACCGATGGTGTCA CATCTGCCAAAGGTCGCACAAAACCGAACAAGAACCGACGCCACTCCATTTCCT BLAST |
Tissue | pods |
Gene name | LI_gene_167052; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_290899
Blastp | BTB/POZ domain-containing protein At5g67385 from Arabidopsis with 65.25% of identity |
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Blastx | BTB/POZ domain-containing protein At5g67385 from Arabidopsis with 62.48% of identity |
Eggnog | BTB POZ domain-containing protein(ENOG410XRIY) |
Kegg | Link to kegg annotations (AT5G67385) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421013.1) |
Pfam | NPH3 family (PF03000.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |