| Id Trinity | TRINITY_DN49161_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_291604 |
| Sequence | TTTCCTTTAGCTACATAGCAGCAAGGAGGTCTTATTCCTATGCAACCAAAAAATTAGCAGCAAGGTGCTCATAGAATATTGAAGCAAACATAATTAATAA TAGTCTTCTATCACTTTGCCTATATATATCCACTCTCTTTGTCTCTCCTTTAACCTATCATAGAAACCTAAAAACGGCACCACCATATATACACTCTATT CTTGCATTTAGTTTCTAGTTCACTTTGCTTCCCTGTGATAAACATGGCTCCCATGGGAGACAATGTGGTAGTGTCCAATATGGAGCTAGAGAGGTTGCTT AGCATGAAAGGAGGTAAAGGAGAAGCCAGCTATGCCAACAACTCCCAAGCACAGGCCATACATGCCAAGTCCATGCTTCACCTTCTTAAAGAAACCCTAG ATGGAGTTCAACTTCATGCCCATGATATCCCATTTGTGGTTGTGGACTTGGGGTGTTCATGTGGAAGCAACACCATCAACGTGGTGGATGTGATCATTAA ACACATCATCAAACGCTATGAGGCGTTAGGAATAGATCCACCTGAGTTTTCTGCCTTCTTCTCAGACCTTCCTAGCAATGACTTCAACACCCTCTTCCAG CTCCTTCCTCCAGTAGCCAGCTATGGAGTTAGCATGGAAGAATGCCTTGCTGCCAACAACCACCGCTCCTACTTTGCTGCCGGAGTCCCTGGCTCTTTCT ACCGGAGGCTTTTTCCGGGGAACTCCATTAACATTTTCCACTCAGCTTTTTCTTTGCATTGGTTATCTCAGGTACCAGAAATTGTTCTAGACAAGACGAC AAATGCATACAACAAAGGGAGGGTATTTATCCATGGTGCTAGTGAGATCACAGCAAATGCCTACAAGAAACAATTCCAGACAGACTTGGCAGGCTTCTTG AGCGCAAGGTCAGTGGAGATGAAGACAGGGGGGTCCATGTTCTTGGTATGTTTAGGCAGAACTTCAATGGACCCCACAGACCAAGGTGGTGCTGGCCTCC TCTTTGGGACCCACTTTCAAGATGCTTGGGATGATCTTGTCCAAGAGGGACTAATTAGCAGTGAGAAAAGAGACAATTTTAACATTCCAGTTTATGCACC AAGTCTACAAGACTTTAAGGAGGTGGTTGAGTCTGATGGGTCATTTGCCATTAACAAGCTTGAGGTTTTCAAAGGAGGAAGCCCCCTTGTTGTGAACCAG CCAGATGATGCAAGTGAAGTTGGCAGGGCTCTAGCCAACAGCTGCAGGAGTGTGTCTGGGGTCCTTGTTGATGCACATATCGGAGACAAACTAAGTGAGG AGCTGTTTCTTCGGGTGGCGCGCCGAGCCACCGGCCATGGCAAAGAGCTATTAGAGCAGCTACAGTTCTTTCACATAATTGCATCCCTTACATTTGCTGA ATGAGAAGACACGAAGAAAAAAGCCCTTTGAACATAAGGAGACACACAAAGGAAAGGGCCACCGTAGACCTCTTAATTTTATTCACTCCTTGTGTTGTGT TATGTTTTACACTTTTTACTACATAGAAAGAGCCGAAGCACAAAATAGAGAGAGACATAAAAGACGTTCAGCATTTCCAACCTCTATTCCCTTCCTCTTT TGAGTGTTTTTTGTGTGTTCTTCCTGACTGTAGTTACTTTCTACATAATATGTGCTTTCTGATTTGTGTCCCCTTGGACCCGAAATTAGAAGGCTAGGAA ACTCCTTTTGCTTTCTTAGTAGCTTACATGTCCTTATTTGGTTGAGTTGCAAATATGGAACGGTGTGCCTTGTGTACCTAACGGTTGGAGTGTTGAATAT GCCATTTCATAGGTCATCTCTTCCATTCTTCTAAGTGCATATCAATCACACAAGGTTCTTTTTTTATTATGAGTTTAAAATTTATGTAACTGTGAGCACA TGATACACTATTAATTCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167057; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291604
| Blastp | Indole-3-acetate O-methyltransferase 1 from Arabidopsis with 73.58% of identity |
|---|---|
| Blastx | Indole-3-acetate O-methyltransferase 1 from Arabidopsis with 73.58% of identity |
| Eggnog | indole acetic acid carboxyl methyltransferase activity(ENOG410Y96G) |
| Kegg | Link to kegg annotations (AT5G55250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418327.1) |
| Pfam | SAM dependent carboxyl methyltransferase (PF03492.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |