Ll_transcript_290564

• Id Trinity: TRINITY_DN49163_c2_g3_i2
• Name Transcript: Ll_transcript_290564
• Sequence: CTTTGTTCCCTCCTCTCTCTTTCCTTTCATACCCTTCTCTCTCTTCCTCCTCTCTCTCCCATGGAAATCCTCGCGTTTCTGAATTTGAAACCCAATTTTT GATTTTGAAATTAAACCCATTTCACACAAATCAACCTTCTTTCTATTCTGTATTTAAGGAAAAAAATTATCCTCATATTTCTCCATCAAATTTTTTGGGA TTTTTTCTTCCTTCTAAAAATTGTGTGTTGTGGGTTTGTAAGAGCATAATTTGAGATATTGAATTCTGGGTGTGGATCAAGTTTTGATTTTTATTTGGTT TCGATAAAGGGGTATTGAGATCTCGATGTCTTCTGCGACATCCTCGTATTGGTGTTACAGCTGTAGTCGTTTTGTTAGGGTATGGACGCAGGACACGGTG GTTTGTCCCGATTGCAACGGCGGTTTCATCGAGGAGATCGAGCATCCGGAGCGTGGAATTCACGCGGACGACCGGCGGCGGCGGCTTCCGGCAGCATCAA TGTACATGATTGGCCAGCGCCCAAATTCTGATCAGAATTCTCAGCCCCCTATTCGTCGAACCAGCCGCGGAGGTGGTGACCGGTCACCGTTTAATCCGGT CATTGTTCTGCGCGGTGGAAGATCGACGGAGGGGGCTGCGGGGCAGGAGGGCGCGGAGGGTGGTGGTTTTGAGCTTTTCTATGATGATGGTGCAGGTTCT GGTCTTAGGCCTTTGCCTCCAAGCATGTCTGAGTTTCTATTTGGATCTGGATTTGATAGGTTATTGGAACAGCTTTCTCAAATTGAAACCAATGGTATTG GTAGGTATGAAAACCCTCCTGCTTCAAAATCTGCAATTGATTCATTGCCAACAATTGAGATTGGTGAGGATCATTTAGAATTGGAATCACATTGTGCTGT TTGTATGGAACCTTTTGAGTTGTGCACTTCAGTTAAGGAAATGCCTTGTAAGCATATATACCATGAAGAATGCATTCTTCCATGGCTTGCACTTCACAAT TCATGCCCCGTTTGTCGTCACGAATTGTCTGCTGATACCCCCAATCATAGCACACATTTGACAAGAAGTTCGACTAATTCGCGTGCTTTGAATGAAGATG AAAATGCGGGGTTGACTATTTGGAGGTTACCAGGTGGAGGGTTCGCTGTAGGGAGGTTTTCTGGTGGGAGAAGAGGCAGCGAGAGAGCGCCTCCGGTTGT TTATACCGAAATGGATGGTGGATTTAACAATGGTGGTGAACCTAGGATGATTTCTTGGTCATCTAGAGGGAATAGAGGAGGAAGAGAGGGTGGCGGTTTG CAAAGGTTTTTCCATAACTTGTTTGGTTGCTTTAGGAGTGGTGGAATTCGAATGCAGCAGCGGTCTACTTCAAGTACCGCATCTCCATCCATGGTGAGGG AAAGTTCGTCGCGCACCAATACGGTTGCCTCTCCACGTTCCCGCAGAACTTGGTCTATGGATGTGAACAGCGGAATGAGATCATGGTAAATGGTAGCTTA CGCAAGCAGGGGAAGCTAAAAATATCAACTTTGTTTTCTGTGTTCCCCAACTGAAAAGTTATGTTTAGGGATCATATATGTTGGATTATTGGTTGGTCAA TGTGTACATAATGCATGGATTCGAGCCTATAAAATCAACCGGGTTTTGCGATTCACACATTTTCAGCTGCAGATGATGTATGGTATGAGAGTTAATGTTG TTCATTTTGGATGAGGAATTGTTAATGTTTAAAACTCATTACTCATAATCTGTATTAAAAATAGTGAATAGGGACAAGAAACAGCAATGATAACAGAAAC CAATGGAGAAGAACCAAATAGGAGGAGAATCTGTGCTGTATATGTGTAACTTTTGAGCAGGGGAACATTATATAACCACTATATTTATTCTAGTTTGATA ATGAAATGAAACACCTTCATATTGTTTTATTTATGTTACTTCTTGTTTGTCAAGGGTACAATTTAGTTAGCTTCACTTTATGATGATCTTTCAAATTTAT GACATATTTTGTCATTGTTTTTCTCAAGGAAATTCACAAGTTCAAATGCATGGTAAGCAAAGCAATGCAATGAATCGATTATAATTGCGTTTATCTATTG TATTATCTACATCGTGTTTTATCGATCAATGTAGTGTTTTTTTGTGATGCAATCAATTGCC
• Tissue: pods
• Gene name: LI_gene_167080;
• Additional information: details;

Expression of Ll_transcript_290564

FPKM

• PAB: 17.2
• PNAB: 7.6
• PS1: 12.1
• PS2: 6
• PS3: 8.8
• PW1: 8.7
• PW2: 9.2
• PW3: 6.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_290564

• Blastp: Probable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 50.91% of identity
• Blastx: Probable E3 ubiquitin-protein ligase RHC2A from Arabidopsis with 50.91% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT2G39720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439458.1)
• Pfam: zinc-ribbon (PF14369.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;