| Id Trinity | TRINITY_DN49168_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_291136 |
| Sequence | TCAGGAAGCTGAGCTTGCTAAAGAGAGGACCCACGGATACAAACTGGATCGTGCTCACGTGTTTTCGGTAAACATGTTTGATGACTTTGACAGGTTCATG AAAGTTCCGAATCAGTGGGCTCCTCCTGAAACCAAGCCATATGCTCCAGGGGAAAATCTTCAACATTGGCTAACTGATGCAAAAGCCCGAGATCAGTTTG TGATACGTGCTGGTTCAGATACTGAGGTTCTGTGGAATGACGCAAGGCATTTGAAACCTGATCCTGTGTATAAGCGTACATTTTGGACTGAGAGCTTTGT GCAATGGTCGCCTCTGGGAACTTACTTGGCAACAGTTCACAGGCAGGGGGCAGCTGTTTGGGGAGGTGCTACAACCTTCAACCGTCTTATGCGTTATGCT CATCCACAGGTAAAACTTATTGATTTTTCACCCGGCGAGAAGTATTTGGTAACTTATAGCAGCCACGAACCCAGCAATCCCCGAGATGCTAATAGAGTTG TGATAAATATTTTTGATGTGAGGACTGGTAAACTGATGAGGGATTTTAAAGGAAGTGCTGATGATTTTGCAATCGGAGGTGCTGGTGGTGTCACTGGGGT ATCATGGCCTATTTTCAAATGGAGTAATGGAGGCGATGATAAGTATTTTGCAAGGATGGGGAAAAATGTACTCTCTGTATATGAGACAGAAACCTTTTCT CTCATTGACAAAAAGTCCTTAAAGGTTGAAAATATAGTGGATTTCAGCTGGTCTCCAACTGATCCAATTATTGCACTCTTTGTTCCTGAGATGGGAGGTG GTAACCAGCCTGCTAGGGTAAGTCTGGTTCAAATCCCCAGCAAAGAGGAACTCAGGCAGAAAAATCTGTTCAGTGTCAGTGACTGTAAGATGTACTGGCA AAGCAATGGAGATTACCTTGCCGTTAATGTAGATCGGTTTACAAAAACTAAGAAAAGCACATACACAGGCTTTGAGCTTTTCTACATAAAAGAACGTGAC ATACCTATAGAAGTTCTAGAGCTTGAGAACAAGAATGACAAGATCATTGCATTTGCTTGGGAGCCAAAAGGCAATAGGTTTGCAGTTATCCATGGAGACA ATCCTAAGCCTGATGTTAGCTTTTACACAATGAGGACTGCTCAGCACACTGGCCGAGTTTCAAAGCTCACTACTTTGAAAGGCAAGCAGGCAAATGCTCT GTTTTGGTCACCAGTAGGTCGCTTCATTGTACTAGCTGGGTTGAAAGGCTTTAATGGGCAGTTGGAATTTTACAATGTTGATGACCTTGAAACCATGGCT ACTACTGAACATTTTATGGCAACTGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_167102; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291136
| Blastp | Eukaryotic translation initiation factor 3 subunit B from Arabidopsis with 77.38% of identity |
|---|---|
| Blastx | Eukaryotic translation initiation factor 3 subunit B from Arabidopsis with 77.38% of identity |
| Eggnog | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG5354) |
| Kegg | Link to kegg annotations (AT5G27640) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417208.1) |
| Pfam | Eukaryotic translation initiation factor eIF2A (PF08662.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |