Ll_transcript_291132

• Id Trinity: TRINITY_DN49168_c0_g1_i7
• Name Transcript: Ll_transcript_291132
• Sequence: AATGAATGAAAATTTGATTGTTCTTTGGTGCCACATTATCTGGGTAAAAAGAAGCCTCCTTCAACTGCAAAACCCTATACACTATTTTCTTTCTTCACAC TTTTGCTTCATACAGTTATAGCGAGTAATCATGGCAGAACTTCTGCCAATGAAAGATATTGAAGCCACTGCTTCACGTCTCGGAATCGATCTTTCCACCA TCGATCTTCATTCCATTCGCCTCCCCCACTCCGATAATGTTGGCATCGATAGTGATGATGAAGATGTTCTCAATGAGGAGAATCTGGAGTTTGAGTCTGG ATTTGGAAACATTATAGTCGTGGATAACCTCCCCGTTGTTCCGAAGGAAAAATTTGAGAAGCTTGAAAGTGTTATTCGTAAAATTTATAGTCAGATTGGT GTTATTAAGAACGATGGACTATGGATGCCTGTTGATCATGATAATGAGAAAACTTTGGGTTACTGTTTCATTGAGTACAATACCAATCAGGAAGCTGAGC TTGCTAAAGAGAGGACTCATGGATACAAATTGGATCGCGCACATATATTTTCGGTGAACATGTTTGATGACTTTGACAGGTTCATGAAAGTTCCAGATCA GTGGGCTCCTCCTGAAACCAAGCCATATGCTCCAGGGGAAAATCTTCAACATTGGCTAACTGATGCAAAAGCCCGAGATCAGTTTGTGATACGTGCTGGT TCAGATACTGAGGTTCTGTGGAATGACGCAAGGCATTTGAAACCTGATCCTGTGTATAAGCGTACATTTTGGACTGAGAGCTTTGTGCAATGGTCGCCTC TGGGAACTTACTTGGCAACAGTTCACAGGCAGGGGGCAGCTGTTTGGGGAGGTGCTACAACCTTCAACCGTCTTATGCGTTATGCTCATCCACAGGTAAA ACTTATTGATTTTTCACCCGGCGAGAAGTATTTGGTAACTTATAGCAGCCACGAACCCAGCAATCCCCGAGATGCTAATAGAGTTGTGATAAATATTTTT GATGTGAGGACTGGTAAACTGATGAGGGATTTTAAAGGAAGTGCTGATGATTTTGCAATCGGAGGTGCTGGTGGTGTCACTGGGGTGTCATGGCCTGTTT TCAAGTACTAAACTCTGTCTCTCTCTCTCTTCATAAATATTTTGATATCCAGATTTAGTGCAAGTATTTCAGCATCTTCATGGGCCTAATGCATTCATGC TATTATATTTTCAGATGGAGTAATGGAGGAGATGATAAGTATTTTGCAAGGATAGGAAAAAATGTACTCTCTGTATATGAAACTGACACATTTTCTCTTG TTGACAAAAAGTCTATAAAGGTTGAAAATATAATTGATTTCAGCTGGTCTCCGACTGATCCGATTATTGCACTCTTTGTTCCTGAGATGGGAGGAGGTAA CCAGCCTGCTAGGGTAAGCCTGGTTCAAATCCCCAGCAAGGAGGAACTCAGGCAGAAAAATCTTTTCAGTGTCAGTGACTGCAAGATGTACTGGCAAAGC AATGGAGATTACCTTGCTGTTCATGTAGACCGGTTTACAAAAACCAAGAAAAGCACATATACAGGCTTTGAGCTCTTCTACATTAAAGAACGTGACATAC CTATTGAAGTTTTAGAGCTGGAGAACAAGAATGACAAAATCATCTCGTTTGCTTGGGAGCCAAAAGGCCATAGGTTCGCAGTTATCCATGGTGATAATCC CAAGCCTGATGTTAGCTTTTACTCAATGAGGACTGCTCAGCACACTGGCCGGGTTTCAAAGCTCACTACTTCGAAAGGCAAGCAGGCAAATGCTCTGTTT TGGTCACCAGTAGGTCACTTCATTGTACTGGCAGGGTTGAAAGGCTTTAATGGGCAGTTGGAATTTTACAATGTTGATGACCTTGAAACCATGGCTACTA CTGAACATTTTATGGCAACTGATATTGAATGGGATCCAACTGGAAGGTATGTTGCTACAGCTGTTACTTCAGTTCATGAAATGGAAAATGGTTTCAATAT ATGGTCTTTCAATGGCAAGCATCTCTATCGGATACTGAAGGATCACTTCTTTCAGTTCTTATGGCGTCCAAGGCCACCATCTTTCTTGAGCGCTGAGAAA GAGGAAGAGATTTCAAAGAACTTGAAGAAGTACAGTAAGAAATACGAGGCCGAAGATCAAGACGTTTCGTTGCTGCTGAGCGAGCAGGAGCGTGAGAAGC GTAGGTTGTTGAAAGAAGAGTGGGAGAAGTGGGTGAATGAATGGACGAGATTGCACGAAGAAGAGAAGTTATATAGGCAAAATCTGAGGGATGGAGAGGG TAGTGATGAAGAAGAGGAATATGAAGCGAAGGACATAGAAGTTGAGGAAGTGATGAATGTAACAGAAGAGGTCATTGACTTTGAATATGATCAAGAATGA AACCTATAACTGGAATTCATAGGATTCAAACACTGAATACTGTTAAACAACATGCTTCAAGTTTGATCCTTGTAAAACCCAGTTTTGTAGGTTTGTTTAT TTATTTATTTATTTGTGGAAGTATCTTTTTATCTAATTTAACATGGAAGATTGATTATTTTGCTATTCCCTTTGGGCAAAGCCACTTTCATTCATATTCA AAA
• Tissue: pods
• Gene name: LI_gene_167102;
• Additional information: details;

Expression of Ll_transcript_291132

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.5
• PS2: 0.2
• PS3: 0.3
• PW1: 0.1
• PW2: 0.3
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291132

• Blastp: Eukaryotic translation initiation factor 3 subunit B from Arabidopsis with 79.7% of identity
• Blastx: Eukaryotic translation initiation factor 3 subunit B from Nicotiana with 79.45% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(COG5354)
• Kegg: Link to kegg annotations (AT5G27640)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435267.1)
• Pfam: Eukaryotic translation initiation factor eIF2A (PF08662.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;