Ll_transcript_291846

• Id Trinity: TRINITY_DN49170_c0_g1_i11
• Name Transcript: Ll_transcript_291846
• Sequence: GAATGAAGCATTGAAGTGAATGCAGTAAACAGTAGTAGTATACTAAATACTTTAATCACTTTAACTTTGGAACTCGGTTTCTATCAACCTTTCTTTTCTG TCTCTCTCATTTCTTTGCTTATACAATTGCCAAACTACTCAATTAACTACTACACTTACACATACCAAAGCTATATCTTCAACTTTTTCTCTTTCTTTCT ATGCAATTCACTTCAACCCTCAAAAGGGTTACATCTAAATCTTTCAAAGAGTGTAAGGAACTTCTCAAAATTCAAACTTTAGCTGTTTTGTTTTCCATCT TAGTTTCAAGCTTAATTTGGAGAGAAAAAAGTTGCAGCTTTGTGTTGTTGTTTTATAAAGTTTGTATTTTTCAGGAGCTTGTAGTTGCTGCAAAATCTTC TTGATCCATTTTCTGTTGTATGCTTAAGCTAAGAAACTCAGTATTTTAAGCTCATTTTTCTGATCAAGCTTATTTTTTGCTTTTAACTTTTTTTGTTCAA TTTTGGCTTGCACATTTATTGAGTGTGCCCAATTTTAGGTAAAAGGGTTGGCCTAATTTGTTTTTATTTTTTTCCTTCTATTTTTGGTGCTTTTATTTTC TTAAGAGTAAAAATCTGTGCTTTAAGGTGCTTGTGATGTTTGTGTATGTGATTTATTAGTATATTAGAGAATCAGTTTGAAATACTTGATTTATAGTTGA AAATAAGAGAAACCCTTTTGAAAATAATGGCTGAAAGGAGCAAAAAGAGGATAAGTTTTAGCAAACTATATTCCTTTTCTTGTTTCAAATCTGTAAGTGG AGATGGTCATTCACAAATTGGGCAGAGAGGGTTCTCGAGGGTTGTGTACTGCAACGATCCGGATAATCCAGACGTGATTCGGATGAGTTATAGAAGAAAC TATGTTTCGACAACCAAGTATACATTTTTCAATTTTATCCCGAAGTCATTGTTTGAGCAGTTCAGGAGGGTTGCAAATATCTACTTTCTTATTGTGGCGT GTGTTTCGTTTAGTGCATTGGCGCCTTATACACCCGTAAGTATTGTCGCGCCTTTGTTGTTCGTGATTGGAGCTACAATGGTAAAGGAAGCTGTAGAAGA TTGGAAGAGGAAAAAACAGGATATAAAGGCAAATAACCGAAAGGTTCAGGTATATAGTAGGAGCCATACATTTGTGGAGACTAGATGGAAGAAACTCCGT GTTAGTGATATCGTTAAAGTGTATAAGGATGAATACTTTCCTGCTGATCTACTTCTGCTTTCATCAAAATACGACGACGGGGTTTGCTATGTCGAGACAA TGAATCTTGATGGAGAAACTAATCTAAAACTAAAGCATGCCTTGGAGGAGACGAATCATCTTCTCGATGAAAAATCTCTCCAAAAGTTTAGTGCTACGGT CAAATGTGAAGATCCGAATGAAAATCTTTACCGATTCATTGGAAATTTATACTATGAGGGTAAAGAGTATCCTCTTTCCTTGCAGCAAATCCTTTTAAGA GGTTCTAAGTTGAAAAACACCGAATATATCTACGGCGTTGTTATCTTTACTGGCCCGGATACAAAAGTGATGCAGAATTCCACAGACCCTCCATCTAAGA GAAGCAAAATTGAGAGAAAAATGGATAAGATAATCTACATCCTCTTCAGTTCCTTGATATTGGTATCCTTTATCAGTTCTCTCTTTTTTGGTGTCGAGAC CAAAAGGGATATTAGTGACGGAAGGTATAGAAGATGGTATCTTCTTCCGTCTGATTCGACTGTGTTTTATGATCCTAGGAACGCGACATTTGCTGCTATT CTTCATTTTTTGACTGCTCTTATGTTGTATGGATATTTGATTCCGATATCACTTTATGTGTCCATAGAACTTGTGAAAGTTCTGCAGAGTACATTCATCA ACCGAGATCAGGAAATGTATTATGAAGAAACAGATAGGCCGGCTCGTGCACGTACGTCTAATCTGAATGAGGAACTCGGACAGGTTGAGACGATATTGTC TGACAAAACTGGTACTTTGACATGTAACTCGATGGAATTCGTCAAATGTTCCATAGCCGGTGTTCCATATGGCCGTGGTATGACAGAAGTGGAGAAAGCA CTTGCAAGGAGAAGGGGAAGTCATGAATCAGGCCAAACTAGTGATGCAGTGGAATCTCAACAGCGGGTTAAGGGATTTAATTTTCGAGATGAGCGCATAA TGAATGGACAATGGGTTAATGAAACACATTCAGACATAATACAGAAGTTCTTTCAAGTTCTAGGTATATGTAATACAGCTATTCCTGATGTAGATGAAGA ATCGGGAGAAGTTTTGTATGAAGCTGAGTCGCCGGATGAAGCAGCGTTTGTCATAGCTGCGAGGGAACTTGGATTCGAGCTTTGTGCAAGGACACAAACA AGCATATCATTGCATGAACTGATCAATGAAAGTGGAAAAAAGGTTGACAGAGTGTACCAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCTCGGAAAAGAA TGTCAGTGATAATACGGAATGAGGAAAATCAATTATTGCTCCTCTGCAAGGGTGCAGACAGTGTTATGTTTGAGAGACTCTCACAAAATGAAAGACAGTT CGAGGCTGAAACCAAAGATCATATTAAAAGATATGCCGAAGCTGGTTTAAGAACTCTTGTAATCGCGTACCGTAAACTTTGTGAAGAAGAATATAAGCTG TGGGGAGAGGAGTTTTCAAAGGCCAAAGCTTCAGTATCTGCAAACCGAGATGCATTGGTGGATGCAGCTGTTGATAAGATGGAAAGAGATTTGATACTTC TTGGTGCTACAGCGGTTGAGGATCGACTGCAAAGCGGGGTTCCGGAGTGTATTGATAAGCTTGCACAAGCAGGAATCAAGTTATGGATATTGACCGGGGA CAAGATGGAAACTGCAGTAAACATAGGATATGCTTGTAGTTTACTTAGGCAAGATATGAAGCAGATAGTGATCTCTCTTGATTCGCCGGACATCCTATCC TTGGAAAAACACGGAGATAAGGAGGCTCTAGTAAAGGCCTCTCTTGGAAGCATTAAGAAGCAAATTTTTGAGGGAATTTCAGAAATCAAGTCTGCGAAAG AGAGTATTAATACAGAAAAGGGAAGTTCGTCATTCGCCTTGATAATTGATGGGAAGTCCTTGGATTTTTCTCTTAACAAGAATTTGGAGAGTTCATTCTT TGAGCTGGCAACTAATTGTGCTTCTGTCATATGCTGCCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGATTGGTGAAATTGGGAACAGGGAAGGCA ACATTATCTATCGGCGATGGGGCGAATGACGTTGGCATGCTTCAGGAGGCTGATATTGGTGTCGGCATTAGTGGCGCTGAAGGGATGCAGGCTGTAATGG CAAGTGATTTTGCAATAGCTCAATTCCGATTTTTGGAGCGTTTGTTATTAGTTCATGGTCACTGGTGCTATAGGCGAATATCGATGATGATATGCTATTT CTTCTATAAAAACATTGCATTTGGATTCACCCTATTTTGGTTTGAGGCCTATGCTTCTTTCTCTGGTCAACCTGCGTACAACGATTGGTACATGTCATTT TACAATGTCTTCTTCACTTCGCTTCCGGTAATCGCTCTTGGTGTTTTCGATCAGGATGTTTCTGCCCATCTTTGCCTAAAGTATCCCTTTCTATATCTAG AG
• Tissue: pods
• Gene name: LI_gene_167115;
• Additional information: details;

Expression of Ll_transcript_291846

FPKM

• PAB: 0.7
• PNAB: 6.1
• PS1: 7.1
• PS2: 2.6
• PS3: 3.5
• PW1: 4.9
• PW2: 9
• PW3: 5.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291846

• Blastp: Probable phospholipid-transporting ATPase 8 from Arabidopsis with 73.12% of identity
• Blastx: Probable phospholipid-transporting ATPase 8 from Arabidopsis with 73.12% of identity
• Eggnog: Phospholipid-transporting atpase(ENOG410XPYK)
• Kegg: Link to kegg annotations (AT3G27870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442564.1)
• Pfam: Phospholipid-translocating ATPase N-terminal (PF16209.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;