| Id Trinity | TRINITY_DN49171_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_291306 |
| Sequence | CGTAAGAGTTTAATATTTATATATCATTAATGTAAAGTTTTTTATATTATTGATATATTATTCACTAACATTTTATTTTTGAAATAAACGAATTTGTTAG ACACCAAATTTGTTGAAGCGTGTTGCAGTGATATTGTTTGTTCATCCATTTTTTTTCATTTCTCTCTTAACATCACCATAGAGAAACATCGATCTCCATT TTTCAACAATTCCATTTTCCTGCGAATTTTCGAAACCCTAGATCCTTCCATTCAATTTTCGCTTTCAACAGTTATCGCTTCCACAATCCAGATCTGAGAG GGTTGAACTTGAATTATGTTTTGAGCTGATTTCGTGAATCTGGGGTCTCTAAATTTGAAAACTTTTCTCCAATGACGAGTGATTCTGGTTCAATTGTTGA AATTTGAGGAATTGGGTCGATTCTATAGTGAAGAAATTTAGAGAATTTAGGTTTTGATTTGGTTAAAGAAGTTTTTGAAGGAGTCATGTTCTATGGTGCA GTGGTTTGGGACCCTTGGCTTATTGTTGGTCAAATTGTTTGTCTTCAATGCTTATACTATATCACTCTGGGAATGTTCTTATCCTTACTTGTTGGAACTC GAGTTTCGCGAATGAGCCTTGTGTATTTCTTTGATTATGTTACCATCACTACCTCTACCATTACTGGTTGGTGTGTTATTGCTTCATTTCTGTTCAGCTC GCTTGCAGGGGCTGTATATATGCTTTATTTGATTGAAAGAGCAAAGAAGTGCTTGGATTTTTCTGCTACTCTCTACATCATTCATCTTTTTATATGCATT GTGTTTGGGGGTTGGCCCTCTTCTATAACATGGTGGATTGTGCAAGGTACTGGAATTGCAGTGATGGCTTTGCTAGGTGAGTATCTGTGCATCAAGCGTG AACTCCGGGAGATACCGATAACACGATATCGTTCAAATGTTTGATTGGCACAAGTAACATGAGTTTTGAATTCGAGAAAGGAGTTTTGTTGCGGGATGAT GATAACTTTTGTTTCTGTACATCGGATGATCTCCAAGATAAAACCGACCGTGTGCGTAATTCTATTATGCCATTGAAGGAATTTCTTTCCTATTCTTTAG TTGCAATATAGAGTTGAACCATAGATAATGAGAGGAGACTAGATATATAACTTTTCTGTAAACTCTGGAAATCTTAATGTATGTTATTCTTATTGTTTCT CTTTTCCCCTATTAGTTTTGGTTAAGGTAATGCCTTTAGTGGGTAGAGGTTCAATTCTTTTACCTTATGTTTGTTTTGGATTTGTTTACATAAACAGTTT GTATAAATTATTAACATACACCTTACCCTTTACTAATAGTAAAACCATACTATTGTCTCCTTATTATGAAAATGGAGCATGTTTCTCACATAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167122; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291306
| Blastp | Protein SYS1 homolog from Dictyostelium with 44.67% of identity |
|---|---|
| Blastx | Protein SYS1 homolog from Dictyostelium with 44.67% of identity |
| Eggnog | SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)(ENOG4111H59) |
| Kegg | Link to kegg annotations (DDB_G0269368) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425094.1) |
| Pfam | Integral membrane protein S linking to the trans Golgi network (PF09801.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |