Ll_transcript_291289

Id TrinityTRINITY_DN49171_c1_g2_i1
Name TranscriptLl_transcript_291289
SequenceGCTATGGATCAGTTCAGTCTGAGATGCAGCGCAATGAAGGGAGGCTCACTTTGGAGCAAGTCCTAAGATATGGGGCAGACATTGCACGTGGGGTTGTTGA GCTTCATGCTGCAGGTGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTCAATGCAAATGGTCATGCAGTGGTTTCTGATTATGGACTTGCAACA ATTTTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCGGAGTGTGACAACTCAAAGATCCATTCCTGTATGGAATGTATTATGCTTAGTCCACATTATACAG CACCCGAGGCTTGGGAGCCAGTGAAGAAGTCTTTAAATTTGTTCTGGGATGATGCAATAGGTATATCTTCAGAGTTGGATGCCTGGAGTTTTGGTTGTAC ATTGGTGGAGATGTGCACGGGTTCCATTCCGTATGTGGAGCAACTCTTTTCTCAAATCTTATGTTTCCCACTCTTCTTTTTTATTTATTTATAATTTCTT AGTCCAAAATCTATATTTCTGCAGTTGGGCTGGTTTAAGTGCGGAAGAAATTTATCGAGCAGTTGTTAAGGCGAAGAAACTACCTCCACAGTATGCTAGT GTGGTTGGTGGTGGAATTCCTAGGGAATTGTGGAAGATGATCGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAATGCAATGCTAGCAA TATTTCTCCGCCATTTGCAGGAAATACCACACAGTCCTCCTGCAAGCCCTGATAATGACTCTGTTAAAGTCTCTGTGTCAAATGTGACCGAACCTTCCCA AGTACCTGAATTAGAAGTTCCTCAGGAAAATCCAAACCATCTTCTTCATCGACTTGTGTCTGAAGGGGATGCCAGTGGTGTTAGAGATCTTCTTGCAAAT GTGGCATCAGAAAATGGCAACAACTACATATCTTCTCTATTGGAAGCCCAAAATGCTGATGGGCAAACGGCTCTCCACTTAGCTTGTAGGCGTGGCAGTG CAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAGGCAAATGTTGATGTCTTGGACAAAGACGGAGACCCCCCTCTTGTTTTTGCACTGGCAGCTGGGTC CCCAGAATGTGTTCGTAGCCTCATCACAAGAAATGCTAATGTGAGGTCACGATTGAGAGACGGCTTGGGCCCATCTGTGGCTCATGTTTGTGCCTATCAT GGCCAACCAGATTGTATGCGAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGACGAAGGTGAATCTGTACTGCATAGGGCAATTTCCAAGA AGTACACAGACTGTGCTCTCATGATATTGGAGAATGGGGGCTGTAGATCAATGGCCATCTTGAATTCAAAGAATCTGACACCACTGCACTTGTGTGTGGC AACATGGAATGTCGCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCCAAAGCAATTGACATACCTAGCTCCGTTGGCACTGCCTTG TGCATGGCAGCTGCTTCCAAGAAAGATCATGAAACTGAGGGTAGAGAACTGGTACGGATATTGCTTGCAGCAGGAGCAGATCCTTCTGCTCAAGATTCAC AGAATGGGAGGACAGTTTTGCATACAGCTGCTATGACTAATGATGTGGACTTGGTTAAGGTTATTCTTGCTGCTTGTGTTGATGTCAACATTTGCAATGT GCACAACAGTATACCTCTTCACTTAGCCTTAGCTAGGGGCGCGAAGGAATGTGTTGGACTGCTTTTAGCTGCAGGGGCAGATTGTAATTTGCAGGATGAT GATGGTGACAATGCTTTCCATATAGCAGCACAGACAGCAAAAATGATACGCGAAAATCTTGATTGGCTTATCGTGATGCTAAGGAATCCCAATGCTGGTA TTGAAGTCAGAAACCACAGTGGCAAGACGCCACGTGATATCTTGGAGGCCCTTCCCCGAGAATGGATATCTGAAGATCTGATGGAGGCACTCATGAACAG AGGAGTTTGTTTGTCTCCTACGATATTTGAAGTGGGAGATTGGGTGAAGTTTAGAAGAACTGTCGTAACTCCAATACATGGGTGGCAAGGTGCTAGGAAG AAGAGTGTTGGCTTTGTGCAAAGTTTTCTGGACAGAGATAATCTCATTGTTTCATTTTGTTCTGGAGAGGTTCATGTTCTGGCAAATGAAGTTGTAAAAG TCATTCCATTGGACAGGGGACAACATGTACAGCTAAAAAAAGATGTAAAAGAGCCCAGGTTTGATTTAATACCTTTTTCATATTACATGTCTATGTGTGA GGGTTTATATTTTTCACTATCAGATGAGAAAAAGCTTTCAGGAACAGGATAAGACATTCTCATAATCTCATGAGAACAAAATGAAGCACTAAGTGGCGGA TTCCATGTGGATAGAGGGGAGTCCCTACGATTTTGAATTTTTTCATATATGTATATATTAGGAAAATATATACTTTTGAAGAAAATAAAAGCTGAAATTT TGACCATACAATAGTACATTCATTTGACAACATAAAAAAACACATGTATTTATCTTCTAATTTTGATTTTGCAAATAAAATCCACTAACCAAGATCCACA ACCTTCAGAACGCTACCATTGTTTTATAGATAAAAACTAGCTTTGCAATGGATATGCTTATTTTTTTTGGCTGTGTAGTACGTATAGGAATAAGTTTATA AGGAAGTTTAAATAGTATCAACATCTATTTTTAACATTGCATTGTTTGTATAGTATTATTAATACCGTACTGGTCATCAAATCGGTTAGGGTACTGTTTA ACCGGTGATTCACTAATTAAACTGC BLAST
Tissuepods
Gene nameLI_gene_167123; 
Additional informationdetails; 

Expression of Ll_transcript_291289

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_291289
BlastpE3 ubiquitin-protein ligase KEG from Arabidopsis with 74.27% of identity
BlastxE3 ubiquitin-protein ligase KEG from Arabidopsis with 74.27% of identity
EggnogAnkyrin Repeat(COG0666)
KeggLink to kegg annotations (AT5G13530)
CantataDBLink to cantataDB annotations (CNT0001786)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019437104.1)
PfamAnkyrin repeats (3 copies) (PF12796.6)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;