Ll_transcript_291317

• Id Trinity: TRINITY_DN49171_c1_g2_i9
• Name Transcript: Ll_transcript_291317
• Sequence: GCTATGGATCAGTTCAGTCTGAGATGCAGCGCAATGAAGGGAGGCTCACTTTGGAGCAAGTCCTAAGATATGGGGCAGACATTGCACGTGGGGTTGTTGA GCTTCATGCTGCAGGTGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTCAATGCAAATGGTCATGCAGTGGTTTCTGATTATGGACTTGCAACA ATTTTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCGGAGTGTGACAACTCAAAGATCCATTCCTGTATGGAATGTATTATGCTTAGTCCACATTATACAG CACCCGAGGCTTGGGAGCCAGTGAAGAAGTCTTTAAATTTGTTCTGGGATGATGCAATAGGTATATCTTCAGAGTTGGATGCCTGGAGTTTTGGTTGTAC ATTGGTGGAGATGTGCACGGGTTCCATTCCGTATGTGGAGCAACTCTTTTCTCAAATCTTATGTTTCCCACTCTTCTTTTTTATTTATTTATAATTTCTT AGTCCAAAATCTATATTTCTGCAGTTGGGCTGGTTTAAGTGCGGAAGAAATTTATCGAGCAGTTGTTAAGGCGAAGAAACTACCTCCACAGTATGCTAGT GTGGTTGGTGGTGGAATTCCTAGGGAATTGTGGAAGATGATCGGAGAGTGCTTGCAATTCAAGCCATCTAAAAGGCCTACTTTTAATGCAATGCTAGCAA TATTTCTCCGCCATTTGCAGGAAATACCACACAGTCCTCCTGCAAGCCCTGATAATGACTCTGTTAAAGTCTCTGTGTCAAATGTGACCGAACCTTCCCA AGTACCTGAATTAGAAGTTCCTCAGGAAAATCCAAACCATCTTCTTCATCGACTTGTGTCTGAAGGGGATGCCAGTGGTGTTAGAGATCTTCTTGCAAAT GTGGCATCAGAAAATGGCAACAACTACATATCTTCTCTATTGGAAGCCCAAAATGCTGATGGGCAAACGGCTCTCCACTTAGCTTGTAGGCGTGGCAGTG CAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAGGCAAATGTTGATGTCTTGGACAAAGACGGAGACCCCCCTCTTGTTTTTGCACTGGCAGCTGGGTC CCCAGAATGTGTTCGTAGCCTCATCACAAGAAATGCTAATGTGAGGTCACGATTGAGAGACGGCTTGGGCCCATCTGTGGCTCATGTTTGTGCCTATCAT GGCCAACCAGATTGTATGCGAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGACGAAGGTGAATCTGTACTGCATAGGGCAATTTCCAAGA AGTACACAGACTGTGCTCTCATGATATTGGAGAATGGGGGCTGTAGATCAATGGCCATCTTGAATTCAAAGAATCTGACACCACTGCACTTGTGTGTGGC AACATGGAATGTCGCTGTTGTGAAGAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCCAAAGCAATTGACATACCTAGCTCCGTTGGCACTGCCTTG TGCATGGCAGCTGCTTCCAAGAAAGATCATGAAACTGAGGGTAGAGAACTGGTACGGATATTGCTTGCAGCAGGAGCAGATCCTTCTGCTCAAGATTCAC AGAATGGGAGGACAGTTTTGCATACAGCTGCTATGACTAATGATGTGGACTTGGTTAAGGTTATTCTTGCTGCTTGTGTTGATGTCAACATTTGCAATGT GCACAACAGTATACCTCTTCACTTAGCCTTAGCTAGGGGCGCGAAGGAATGTGTTGGACTGCTTTTAGCTGCAGGGGCAGATTGTAATTTGCAGGATGAT GATGGTGACAATGCTTTCCATATAGCAGCACAGACAGCAAAAATGATACGCGAAAATCTTGATTGGCTTATCGTGATGCTAAGGAATCCCAATGCTGGTA TTGAAGTCAGAAACCACAGTGGCAAGACGCCACGTGATATCTTGGAGGCCCTTCCCCGAGAATGGATATCTGAAGATCTGATGGAGGCACTCATGAACAG AGGAGTTTGTTTGTCTCCTACGATATTTGAAGTGGGAGATTGGGTGAAGTTTAGAAGAACTGTCGTAACTCCAATACATGGGTGGCAAGGTGCTAGGAAG AAGAGTGTTGGCTTTGTGCAAAGTTTTCTGGACAGAGATAATCTCATTGTTTCATTTTGTTCTGGAGAGGTTCATGTTCTGGCAAATGAAGTTGTAAAAG TCATTCCATTGGACAGGGGACAACATGTACAGCTAAAAAAAGATGTAAAAGAGCCCAGGAGACCTTTAACAAGGTGAGGAGGAGAGTGGAGAAGAGAATG AGAAAGGATTGGAGCGCATTTTCGGGGTTTAAATTTGGACACTCACAGTTCACCCTCTCACAAATAACCAACTGAGTTGACTCAAGAGGCACTAGGTCTA CATTTCAAGTTGTTAACAAAGCTTGCCATTTCCTTTGCATGTTTACAAAAGAAACACCATTAAAAGCCCATGTGCAGAGCACCAAAGGGAAGCCAAAAAA GTTGACCTATCCCAAACAAAATCAATAGATGAAAAACAGTCATTGAGATTCCAATTGTTCCTTTCCAACCAAATACACCAAAGGATAGAAAAAAGAGCAC TGCCACAGAATTTTGACATCTTTGTGTGTGGCAAAACCTCTTTACTTAATTAGGAGGAAATTGCGCAAGTGCAAAGGGTATATCCATGGCTCATCAATCC CATGCAATCTATTCCAAAGCACGTCTGCCGCAGAGCAATGTAAAAAGAGATGAGTCTCGCTTTCAGCATCTAAATGACACATTAGGAGACAAAGCGATTA GAGGTTTGTGCTTTTGCTTTTGGAGCATGTCTTTGGTGTTAATTCAGTGAAGAATAGTGGAGTAGACAAAAGCTTTAACCCTTGACGGAGCTTTGGACTT CCAAATGGGGTTTTCCAAAGTAAAACTGATTGGGCTGTGAGGAAGTGTCAAGAACTGAAAAAAGGATCTGCATGTGAACATTCTCAAGGGGTCAAAGTTC CAAATTCTAGCTAATCACTTGTGTGGAGTTTCTTTAGTGTTTAGTAAACTATGTAAAACAATTTCAGAGATCCGTGTTCTGTTGTGGGCAAGACAATTAG GAAAGATTTAAAGATTAATGCTTTGCTAATGGATAGGATTTATAATAGATGATTATGGTGTCATTCGAACCATGTAGCCGATCCCACCTAGTGGGACTAA GGCTTAGTTGATGTTGTTGTTGTGTTATGTTGTGGGGATTTTCCCCTTGCTATTCCAAATGCAGGGGTTAGTTAAAGAAGTACATAACAGTTGTGAAATT AAACCAATATAGCTCCCATATCCCTTTTAATGACGACCACGATAATATATTTAAAGAAACCATTTGCTTGGCATGAAATTGAGACCATAGAGGCATGCTT AAGCTGAAACGATAAAACTTTCTGGTTTCATTTAGTGTTCAGCTGCTACCTAATACATTGATCCCTGCTAGCAAATTACATTTTCCCTAGGTTATTGGTT TCTTCTACTGATATCTGGTTGAAAATGACCATTAATGTCTAGATATTGTTAAAAGCATTGGTGTTATTTCTTCTGTTTTGCTGAATCCTATTATTCTTTT ATGCAAAATATTTTCTAGATAGTTTATTGCAAGGCTGCTAAGCTAGCCAATAATAATAGAAGAAAAGGTAACTGCTAGTATCTCAGCTTCTAAAAGAATG TACAAATGTCTAGGAGTAGAGATTTATTTGGATTTTGAACTAGTAAGGGATCATTTGTGTTAATCACAAAGGTGATGCAATGGCAACTTACCTTCCTTAT AAAGGCTGAGTAGTGAAATCTGCTTCAAAGGAGACTGAATATGATTCTGGAATAAACATGTTTAAAAGAAAAGCCAAAAGGACTCTAGTGATCAAGTTCT ATTATCTACCGCCAGTGCTTGTTCCATATAGACATAATTACATTTCCTTTGGTAAACCCATGGATTTTTGGAGGATGTCCAATGTGACCAAATAGCCCAA ATAGTTGCAAGCATCTTTGTACTTTTCTACGGAAAAAAATATTTTTTGTTCTGTGGATATCTTGTACCTGTTATATCTTCTCTTCATGGGTTTTTAGTTA AATCACAATATATGTCCAATTTGACGGGTTGGCATGCATTGTTGCTTCATTCTGTTACTTGATTTTAATTTTTATGTCACTTTTTGGAGGATGCTTTATC TTCTTCCTTTGTACTTCTCTCTTCACATCTAATAATATTACTTTTATCATAAAAATAACAATATAGTATACAATCTATGCTTCATTGTTAAATTGTGTTA ATTAGTTCTATGGTGTGCTTGAAATCCTTAATGATTTGACATTTGATTTTGATGACCATTTATCTGTTAGGTTTGGTTGGCGTGACCAGTCACGGGACAG CATTGGGACAGTATTATGTGTTGACGATGATGGTATCCTCCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCAGCTGAGATGGAACGG GTTGAGGAATTCAATGTTGGAGACTGGGTTCGTATCCGTCCTACTCTAACATCTGCAAAGCATGGTTTAGGTTCTGTGACACCAGGAAGCATTGGAATTG TATATTGTATCAGACCAGACAGTAGTCTGTTAATAGAACTGAGCTATCTTCCAAACCCATGGCTTTGTGAACCAGAGGAGGTTGAGCATGTTGCTCCTTT TAGGATTGGGGATCGGGTATGTGTGAAGCGGTCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGCGAGATT GAGAATGATGGTCTCTTAATAATAGATATACCAAACCGACCCATTCCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAGGATTTCAAGGTTGGTG ATTGGGTCAGAGTGAAAGCTTCAGTGTCGTCTCCAAAATATGGATGGGAGGATATTACAAGGAACAGTATTGGGATAATTCATAGTTTGGAGGAGGATGG TGATGTGGGTGTTGCCTTTTGCTTCAGAAGTAAGCCTTTTTCTTGCTCACTAACTGATGTGGAGAAAGCTCCTCCCTTTGAGCTGGGACAAGAAATTCAT GTGATGGCATCTGTTACTCAGCCACGACTTGGGTGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATCGACATGGATGGTGCTCTCAATG TGAGGGTCACTGGTAGGCACAGCTTCTGGAAAGTTTCTCCTGGTGATGCAGAACGACTTCCAGGATTTGAAGTTGGTGATTGGGTTCGCTCAAAATCAAG CCTGGGAACCAGACCAAGTTATGACTGGAGTGGTGTTGGGAGAGAAAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACCTGGAGTTAGCTGGC TGTTTCCGTAAAGTGAAGTGGATCACCCACTACACTGATGTTGAAAAGGTTCCTAGCTTTAAAGTCGGGCAATATGTTAGGTTCCGAACTGGTTTGGTTG AACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCACAAGGGGTTATAACTAGCATTCATGCTGATGGAGAAGTCAGGGTCGCATTCTTTGGTTTACC AGGATTGTGGAGAGGAGATCCTTCAGACCTGCAGATTGAACAAATCTTTGAAGTTGGAGAG
• Tissue: pods
• Gene name: LI_gene_167123;
• Additional information: details;

Expression of Ll_transcript_291317

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0
• PS2: 0.2
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291317

• Blastp: E3 ubiquitin-protein ligase KEG from Arabidopsis with 74.22% of identity
• Blastx: E3 ubiquitin-protein ligase KEG from Arabidopsis with 74.22% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (AT5G13530)
• CantataDB: Link to cantataDB annotations (CNT0001786)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437104.1)
• Pfam: Ankyrin repeats (3 copies) (PF12796.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;