Id Trinity | TRINITY_DN49171_c1_g3_i8 |
---|---|
Name Transcript | Ll_transcript_291313 |
Sequence | GTCCATATTAAGTATTCTCATTTCTTGCAATAACGCAATATTCTCACATAAGTAGTAGTTATATATATATATATATATATAACTACTACTTATGTGAGAA TATTGCGTTATTGCAAGAAATGAGAATACTTAATATGGACCATTGGATCTTGATTGAACGGTTAAGATTAAAATATACATGCATATGATTATAATGTTAC CAATAACTAACTTTTAATATTAGCCGTCATGATTGGTTGGTTGTAAGGTCTACATGAGATTCATTGTTCTTACAATTTTTATACGAGAATTATTATCACT TGAGTAGCTCAGTGGTGCCAGAGCTTCCTGCATTGGGTTGCACTTCTTTTAATAACAAAGTGTTGTTTGCGATTGAGTGAAGCTTGCTGGAGTTTTAGTA TTCTCAGCTATTCCTTTTACTGTTGTGAAAGCTATAGCAAACAGTCCGCTAGGGGAATCACTTCAGAAGAGAATGGAGCAGACTAAGAAATTTGCTTTGC AAAACTCAGCGAAATTCAAAGCCTTAGCCGAAAAGGCCAGAAAGGAGAGGTAATTCCCGCTTTTGGTATGGAGAAGATCGGCCTCGTTGGCTAGGTCCTA TTTCATATGATTATCCGTCGTATCTTACTGGCGAACTGCCTGGAGATTACGGCTTCGACATTGCTGGCCTTGCCAAGGATCCTGTGGCGTTGCAGAAATA TTTAAACTTTGAGATATTGCATGCTCGGTGGGCTATGCTTGCATCTGTGGGTGCTCTCGTTCCCGAAATACTAGACCTATTGGGAGCTTTTCACTTCGTA GAACCTGTCTGGTGGCGCGTTGGTTATTCAAAGCTCAAGGTTAGCTTGTTCTGCCTCTCTGACCATCTTCTGTATAGTCTTGCATATCAACTTGGTGAGC TTTATCATATACATGTTTGTGCCATTAAATATATAATTATTTCCCATTGGTCATTTCTTGAATTATCAACTAAAAGGGGAAAGTTTTGTCTTCTTGCAAA TGTTGCTCAACAAATTGTGATAATGGGTATGCATACTCCTGGATTGAGTAAACTGATAAAGATAATTGTGATAATGCAATTGACATTCCTTGTGAATCTT TCAATTTTCGTAAGGGAGATACTCTAGATTACCTGGGCATCCCGGGTCTTCACTTAGCTGGAAGTCAGGGCGTGATCGTGATTGCTATTTGCCAAGTACT CCTTATGGTTGGACCAGAGTATGCTAGATATTGTGGGATTGAGGCGTTGGAGCCTCTCGGAATATATCTTCCGGGAGATATAAATTATCCCGGAGGTGCA TTGTTTGATCCCTTAAATCTGTCCAAAGATCCTGAAGCTTTTGAGGAGCTGAAGGTGAAAGAAATAAAAAATGGGCGCTTGGCAATGGCTGCTTGGTTGG GCTTTTCCGTTCAAGCCGCTCTGACGGGTAAAGGTCCTGTGCAGAATCTTGTGGAGCACATCTCCGATCCTTTCCACAATAACTTGCTGAGTTCACTCAA CTTCATGAAAGTAGTGTTGTAATATTGGAAAGGAATTTATATCTACTTGGCTGCTAGAGGGAATTCAGGTTAAATTGGTAAAGCCATGGTGTTTGTCTGG CTCTCCACTTTCAATACTCAAATATCATGTATAGAAGAAACTGTTGTTTTTGTTTTGTAAGATATACTAATATTTAGTTCAGTGTTATTAATACCCAAAA CCAGTTAGAATACCGGTATAATATAAGGATTCAATCGGTGATTCACTAATTAAACTGCATACTGAGGAAATTAGAATTACATATATAATATATTATTAAT GTTGAAAACTCAATAGAAAACAATATTTTTTTATTTTCATTAAAAAATAATTTTAAATAAAAACCGGTTGGTATGACCGATATGGTTCAATTGAAAACCG ACCGGTATGACTGGTTTTGACCGGTATGATTGCATGACCGGTTTAATTGGCTGGTACGAACCAGTTTTACAACACTTAAGAGCAAACCTTACTTATGGAA AATTGTGTAGGAGATAAGACACAAACTTAAGTTATTGGATATGGAGGGATTGTGTTGATCTTATACCTTGGGTTCAATGAACAGTTTCAAACTCTTGCCC TGAAGAATCCAACTATCTCCTTGATGAAGAAAAACCACATCAGAATCCATGCCAAGGTTGCTTCATTACAGTATCTGGTTCACTCTTTTACCTTATGCAT CGTGTATCGAATTCAGTATACCATGTACCGAGAGTTTGTCATAAAAGAAACCTTGTAATGAAAACATACAGAAAAAGTTATGAACCGATATGAACCGCAT ACCAAATTCGGAACCATGTACCATCTAACTTAGGTCTAAATATATACAAACATCAAAACTTCTATTGGTGATGCTTGTACCATCTATGTGCTTAGTGCCA AGATATTATTAGTTGAGTTCATTATAATCATTGCTTTGTTAGTGTCTCTTGGTCTTATAGTTGTTAATGTTGTATCAGTTTTTTGTTTATATTTGTTGAA GTCATATTCCTTTATTTTGCTTTATGTTATATATGTGCAGATTCTTGGGCAGAGTCAACTGATTTAACAAACAACTTATTGTTTACAATACCATTGTAGA CTGCAGTACAAAGAACTGAATAGCCAATAAAAGTGAACCAAATACTAAATATGTAAGTGCCAAGTGTCTCATATGAATATCTTGAGTTAATATTTGTTGA TGGTTATCTAGTTATAAAAGGTACTGTATTGACCTTCACCTTAGTATGTTAAAGTATCAGTGGAAAATAACATATATTCTATCTTGTATCACTTCATGTA CTAACATTTCTGATTGGTCAGAAAAATAT BLAST |
Tissue | pods |
Gene name | LI_gene_167124; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291313
Blastp | Chlorophyll a-b binding protein 7, chloroplastic from Arabidopsis with 84.85% of identity |
---|---|
Blastx | Chlorophyll a-b binding protein 7, chloroplastic from Arabidopsis with 85.38% of identity |
Eggnog | Chlorophyll A-B binding protein(ENOG410YIPW) |
Kegg | Link to kegg annotations (AT1G76570) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449531.1) |
Pfam | Chlorophyll A-B binding protein (PF00504.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |