| Id Trinity | TRINITY_DN49172_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_291109 |
| Sequence | CAAAATAGGGCAAATTTGAGAGAGTATTCTATAAAACAACCACACTGTGTAAAACCCTAGCTTCTTCTATTTCGTAGCATAGCCGCATGTTCTAAGTTTC GAACACAAGCTTAGAGAGTTCACCGCGGCTGGATAGGGACGAGATTGCAAAATGAAGTTCAACATTGCTAACCCCACCACTGGATGCCAGAAGAAGCTGG AAATTGATGACGATTTGAAGCTGTAATTTCTTCATTTTATCTTTCCTTTTTATTTATTTTTTCGTTGCCATGACGATTCGTTAATTAAGTGAAGGTCTAG CACTTCTACATTTTTTAGTATGAATGGGATTGTGAACAATAATTGATATATATACTATGTTTTCCCTTTCTGTTGTGATGTTTTTGTACTTTTAGGCATC AAATGTGTGTACACAGTGTATAAGATTGTATTGGGATATAGGATAATCGCATTATAGAGAAACTTGATGTAGCACCTACTACCGAAAGCACAAAAGAATC ACGCCTTAAGAGTTTGGCCATGTGTGAAAGAAATTCATGGAATCAAATTGGATTTAAGTTTAAATGGTTAATTTTGACATTGTTTAATTCGTGCAATTGA CCTCTCTTGATGGAAAGCCGCTTGGTGTTGTTGTTGTAATGTTACTCTACCTTCAATTGCAGCCGGGCATTTTGGGATAAGAGGATCTCACAGGAGGTAC TTGGTGATGCTCTAGGCGAGGAATTTAAAGGGTATGTCTTCAAGATCACTGGAGGATGTGACAAACAAGGATTCCCGATGAAGCAGGGTGTGCTGACCCC TGGACGTGTCCGTCTCTTACTCCATAGAGGGACCCCATGTTTCCGTGGATACGGAAGGCGTACTGGAGAGCGCAGGAGAAAGTCTGTCCGTGGTTGTATT GTTAGCCCAGACCTCTCTGTTCTGAATTTGGTAATTGTGAAGAAGGGAGATAATGATTTACCTGGCTTGACTGACATTGAGAAGCCAAGAATGAGGGGAC CCAAGAGAGCATCTAAGATCCGCAAGCTGTTCAACTTGTCCAAGGAGGATGATGTGAGGAAGTATGTTAACACATACCGCCGAACCTTCACAACCAAAAA TGGTAAGTGTTTGTTTCCCAGACTCTACTTATCTATCGTATGCTTTATGCTGCTGCTAAGACTGGTGATCATGACTTTTTTTGGCAATGAATAACTGCTG AAGTAACCCATTTTCATTAGTAGTCATACCTACAATTGTTTGATCGGTACTTCAATGAGGACTTGATATTTGGTTTTTCTACTTTCAGCTCATTTCAATC AATCACATAATATCTTGGTCTTTTTTGGACAGGGAAAAAGGTGAGCAAGGCTCCAAAGATCCAACGATTGGTTACTCCTTTGACACTCCAAAGGAAGAGA GCAAGAATTGCCGATAAGAAGAAGAGAATTGCAAAGGCAAAATCTGATGCAGCAGAGTATCAGAAGCTCCTTGCTTCCAGGTTGAAGGAACAGAGGGAAC GCAGGAGTGAGAGTTTGGCCAAGAAGAGATCCAGACTTTCCAGTGTCACCAAACCATCTGTCACAGCTTAAGCCTTTTCAGCATCATCCATTTTATTGTC TTATTCCATGAGAATGGTTGTGTTTTAATATCTATTTATTATGATTTTACTATTTAAATACATTGAGTTTCTTATTTCTTAATGTTGTTTCTTAATTTTG GAATTAAAGGATTTTGCCGAGTTGAAACTTTTATACATTTTATGTGTTCTGGTATATATATATCTATCCATCTATTACAATAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_167133; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_291109
| Blastp | 40S ribosomal protein S6 from Asparagus with 95.45% of identity |
|---|---|
| Blastx | 40S ribosomal protein S6 from Asparagus with 94.59% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_016181245.1) |
| Pfam | Ribosomal protein S6e (PF01092.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |