Ll_transcript_291115

• Id Trinity: TRINITY_DN49172_c1_g1_i16
• Name Transcript: Ll_transcript_291115
• Sequence: GCAGCTAGGACGCGAACAAGCTCCAAAGTTGAGATCTCAGAATGAAGTTCAACATTGCAAACCCTACCACTGGATGCCAGAAGAAGCTTGAGATCGATGA TGACCTGAAGCTCCGGGCATTCTGGGACAAGAGGATCTCACAAGAGGTTCTTGGTGATGCTTTGGGTGAGGAATTCAAAGGCTATGTCTTCAAAATCACC GGAGGTTGTGACAAACAAGGGTTTCCAATGAAGCAGGGAGTGTTGACCCCTGGTCGTGTTCGCCTCTTGCTCCATAGAGGAACTCCTTGTTTCCGTGGAT ATGGGAGACGCACGGGAGAGCGCAGAAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTCTGAACTTGGTGATTGTGAAGAAGGGTGA CAATGATTTACCAGGGCTGACAGACATTGAAAAGCCAAGGATGAGGGGTCCTAAGAGAGCATCCAAAATCCGTAAGCTGTTCAACCTGTCCAAGGAAGAT GATGTGAGGAAGTATGTCAACACTTACCGTCGAACATTTACAACCAAAAATGGTAATGTTTCTCATCTCTGTCCATTCAATTTAGTTCTTTCCAGCCACA AAGAAGGTGCTGTTGGGATCCTAGAATTCAGTATAATAACGGCGGCCCAATGCAATAGGCTTCCACCCGAGAGATTGGGAGGGTAGATATAAGTAGTGTT ACCCTCACAATCAAAGAGGCCATTTCCAGGCCACAAGGCTAGCAACTTTTCTGTTGCACCGAGGCTTGCCCTCTACATGGTAGAATTTGGTAAAGGAAAA AATAACGTATTGACTGTCACGCAGTTAATATATTATCCTTTCTCATCTCTGCTGCCTACTTGGAAGGTAGAATTGATTAATACTTATTTACAAGTAATTC CTTGTCTCAGCTAGGTACTTATAAGAATTCATCCATTTTAATGTGATGGTTTCAAGTCTGAGTAACATATGATTGGTTGCAGGGAAAAAGGTGAGCAAAG CACCTAAGATTCAACGTCTGGTCACTCCTTTGACACTCCAAAGGAAGCGAGCAAGAATCGCCGACAAGAAGAAGAGGATTGCAAAGGCCAAATCAGATGC TGCTGAATATCAAAAGCTCCTTGCTTCCAGGTTGAAGGAGCAGAGGGAACGTCGTAGTGAGAGTTTGGCAAAGAAGAGATCTAGACTTTCCAGTGCCACC AAGCCATCTGTCACAGCATAAAGCTTTCTATCAGAGATAGACATGAATTTTGAACTACATCCTAGTTTTTAGAAGTCTTATACCATGAGGATGGTTGTTT TTAAACTATATTTGTCATTTTGCTATTTAAATACATTGAGTTTCTTTATTTCTGAATGTTGTGTTTGAGAATTCAATTGAATTTAAGGAGTTTTGCCTGT TGGAACTTTTTATTCAGTTGTGTTGTCCTAATAATCTCTACCCGCCTATTAAAATATCATTAGTTATTAACGCTATTATTTTT
• Tissue: pods
• Gene name: LI_gene_167133;
• Additional information: details;

Expression of Ll_transcript_291115

FPKM

• PAB: 0.3
• PNAB: 1.5
• PS1: 1
• PS2: 0.9
• PS3: 0.9
• PW1: 1.1
• PW2: 1.4
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291115

• Blastp: 40S ribosomal protein S6 from Asparagus with 91.57% of identity
• Blastx: 40S ribosomal protein S6 from Asparagus with 91.57% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419846.1)
• Pfam: Ribosomal protein S6e (PF01092.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;