Ll_transcript_291120

• Id Trinity: TRINITY_DN49172_c1_g1_i19
• Name Transcript: Ll_transcript_291120
• Sequence: GAATTAGAGAAAGTATATAAAATCAGATTGTGTGTAACCCTATTTCCTTCAGTTTCAAAGCTTAGCCGCATTTTCTAAGTTTCGAACGCAGCGTCTGTAC AGGGACGAGATTGCAAAATGAAGTTCAACATTGCAAACCCCACCACTGGATGTCAGAAGAAGCTCGAAATCGATGATGACCTCAAGCTTCGAGCATTTTG GGACAAGAGGATCTCACAGGAGGTACTTGGTGATGCTCTAGGCGAGGAATTTAAAGGATATGTCTTCAAAATCACTGGAGGATGTGACAAACAAGGATTT CCAATGAAGCAGGGAGTGTTGACCCCGGGCCGTGTCCGTCTTTTGCTTCACAGAGGTACACCTTGTTTCCGTGGATATGGAAGGCGTACAGGAGAACGTA GGAGAAAGTCTGTTCGTGGTTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTAATTGTGAAGAAGGGTGATAATGATTTACCTGGCTTGACTGA CATTGAGAAGCCAAGGATGAGGGGTCCAAAGAGAGCATCTAAAATCCGCAAGCTGTTCAACCTGTCCAAGGAGGATGATGTGAGGAAGTATGTTAACACT TACCGTCGTACCTTTACAACCAAAAATGGTAAGTTTTTGTTGCCAGCACCCACTAATTATATCATAATCATTATGCTGTGGGCCTACCTCATGGATTTTT TTGTCAATGAATAACTACAGAATCAACCCATTTCCATTATTAATTGCCTGCTTCTAAGTTTGAATCTGTCAAATTGTTTGATGCCGACTTCAACCAGAGT TCCTATGGTGTTTCTCTACTATTGCCTCATTTGAATATATGTTAGCTTATATTTTGTCTTCTGTAGACATGCAACCTTTTTAATTTAGAGTGTAGACTGA CACTCATGAATCATAGTTTTGCTTATCCTCATTTTGTTGAGAATGCATTTTGACATGTGCTGATTTTCTTTTCCACACTTCCAAACATTTATCATGGATA TTGTAGTGGATTCGAAAGTATCCATTTGAATAGTGGATTTTTTGGTCATAATTTGTGGCGACTTCAATTTCATTTTGGACCGAGAACGAATTTTTAGTAC TAACTAGTGGATGTTCGGTTGCAGGGAAAAAGGTGAGCAAAGCACCTAAGATTCAACGTCTGGTCACTCCTTTGACACTCCAAAGGAAGCGAGCAAGAAT CGCCGACAAGAAGAAGAGGATTGCAAAGGCCAAATCAGATGCTGCTGAATATCAAAAGCTCCTTGCTTCCAGGTTGAAGGAGCAGAGGGAACGTCGTAGT GAGAGTTTGGCAAAGAAGAGATCTAGACTTTCCAGTGCCACCAAGCCATCTGTCACAGCATAAAGCTTTCTATCAGAGATAGACATGAATTTTGAACTAC ATCCTAGTTTTTAGAAGTCTTATACCATGAGGATGGTTGTTTTTAAACTATATTTGTCATTTTGCTATTTAAATACATTGAGTTTCTTTATTTCTGAATG TTGTGTTTGAGAATTCAATTGAATTTAAGGAGTTTTGCCTGTTGGAACTTTTTATTCAGTTGTGTTGTCCTAATAATCTCTACCCGCCTATTAAAATATC ATTAGTTATTAACGCTATTATTTTT
• Tissue: pods
• Gene name: LI_gene_167133;
• Additional information: details;

Expression of Ll_transcript_291120

FPKM

• PAB: 2.8
• PNAB: 21
• PS1: 9.3
• PS2: 12.6
• PS3: 10.5
• PW1: 11.8
• PW2: 7.7
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291120

• Blastp: 40S ribosomal protein S6 from Asparagus with 92.7% of identity
• Blastx: 40S ribosomal protein S6 from Asparagus with 92.7% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426113.1)
• Pfam: Ribosomal protein S6e (PF01092.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;