Ll_transcript_291917

• Id Trinity: TRINITY_DN49173_c0_g1_i1
• Name Transcript: Ll_transcript_291917
• Sequence: GATTCCGTGAAAAAATGGATCACTTTTTGGTATAAATTTTTTCCCAAATTTGTTTTTTTATTGACCTATAATCTGTTCCTTAAAGACGAATAGGAATGCG GTTATTACATGCCGCTCTTTGACAATTCTTCTTCTCCTTCAAACTTTGACACTTCTCTTTCTTCTTCTTTCTCTCTTCAAATTTCAACCCATGCCTTCAT CACATTCTATAACGTTCTTAACTTCTCCGTTCCATTTCTCAAACCGTTCCGCTTTCTGATCCGTTTGCGCAAGATCATGATGGAGATGATGAACGTGACC ATTGACTCAGCCCTCGTTTTCCTCGTACCTTCTTTCTGGGAGATCAAGGTTGCTGTTGCTGCTTCTTTGTTTGTTATCTTTGCTTATTGGTTCTTTACCT ATAGAACCGGTGACCTCGCCGCCGATCTATCGCTTAATCATAACTCTGATGCCTCCGACGATAAAGACAAGATGGGCCTGTTGAAAGGGGATTCTCAAAC CAGTTCTGGATACCTGATCAAGTTAGAACTATTGGCTGCGAAGAATCTCGGTGGTGCAAACTTAAATGGCACATCAGACCCTTATGCCATCATCATGTGT GGGAATGAAAAGCGATTCAGTTCAATGGTCCCTGGTTCAAGAAATCCCATGTGGGGCGAGGAGTTCAATTTTTCTGTTGATGAACTTCCTGTCCAGATCA ATGTCACAATATATGATTGGGATATAATTTGGAAAAGTGCCATTCTTGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGTCAAACTGGTGCAACATGGCA TACTTTGGATAGCCCATCAGGGCAGGTCTGTCTTCATATAAAAACTACAAAACTATCTGCAAATTCTTCCAGAGTAAATGGTTATGGCGGAGCCAACACT CGAAGAAGGATGCCTTTGGAAAAACAGGGACCCACTGTAGTTCACCAAAAGCCAGGGCCTCTTCAAACAATATTTGATCTTCACCCAGATGAGGTTGTTG ACCATAGTTATTCTTGTGCACTCGAGAGGTCATTCTTGTATCATGGGCGTATGTATGTCTCGGCATGGCACATTTGTTTCCATTCCAATGTGTTCTCCAA GCAAATGAAGGTGGTTATTCCATTTGAAGATATTGATGAGATTCGAAGGAGTCAACATGCACTCATTAATCCTGCTATAACAATTATTCTTCGCATGGGT GCTGGTGGACATGGTGTCCCTCCTTTGGGAAGTCCTGATGGTAGAGTCAGGTATAAATTTGCATCGTTTTGGAACAGGAATCATGCATTTAGAAATCTAC AACGAACAGCAAATAATTTCCATGAAATGTTGGAGGTTGAGAAAAAGGAAAGTGCAGAGTCAGAATTGCGTGCACACAGCAGTTCTGTCCGCGGAGGTAA TATAGGAGATAAGCTTCCTGAAGAAAGCATGCCAAAAACTGGAAAACTTCAACATTTTATCAAAGAAGAGGCTTTAGTTGGCATATACAATGATGATTTT CCTTGCACGTCTGAGCAGTTTTTTAACTTATTATTAAATGATGATTCAAATTTTACAAACAAGTATCGTTCTGTGCGAAAGGATACCAATCTTGTGATGG GACAGTGGCATACAGCAGAAGAATATGATGGTCAAGTCCGAGAGATAACCTTCAGATCCCTTTGTAACAGCCCTATGTGCCCTCCAGACACAGCTATGAC AGAATGGCAGCATTTTGTTCTATCACCTGACAAGAAAAAGCTGGTGTTCGAGACTGTGCAGCAGGCACATGATGTTCCATTTGGGTCCTATTTTGAGGTA CACTGTAGATGGATTTTGGAAACAAACACTGAAAGTTCGTGTACCCTAGACATCAAAGTGGGTATGTTTTGGTCGAAGCTCCTCAGACCCATATTTTTGT TCTTTGATATTCTTATTCTATCCTGTTACCATTTTAAACTTTTGAATTGGAAGCAAACTAGAATTCCAGGGCAGTGGGGGTACCAAAACAGGTTATTAGG GGCCATTTGAAAGGATAAACCAATTTGGTGTCGATTTCTTCATCCACTTTGAACACCTGTATGTTCCGGACTTAGGTAACCAAATTGGTGAATTGTTCCT GCAGGTGCACATTTTAAGAAATGGTGTGTGATGCAAACCAAAATAAAGTCCGGGGCAGTAAATGAGTACAAGAAAGAAGTTGAGGTGATGTTAGACGTCG CTCGTTCATATGTAAAGTCGCCCACTCCTGATGATGAGACTGATAAGGCCTCTTCGCAACCTGCTGCGGATCTGGAAAACTAACATTTCTGGTGGACCTG AGATCAGGATTTTAATTATCTGTGTAGTATTGTAACATTCTTGTTCTTTTGTAATTTATCTATATGTGTATTTGTTGGCCATAGGTTTTTGTATAGTATG GTATGTTGGTAACTTTCAGATTGTCCTCATAGAGGATCGTGCCATTTCCACGTGTGTTCTTGAAAGGCTTCCGTGGAAAATGAAATTTTCCTTGTCCTTT TTACACTAAAAACTGTCTGCAAAATTTAGCAGCTTGTTATTTCAGTAGCAGTCAGAATAAGTAACTTTGGTAGATTTTATGAGAGTGGGAATTTACTATT TAAGCTAAAAAGGCAAAAGGTAAAGTTAGCATCTCATATTGGCTTCTCAAAAAGCGGTTAATTGAAGAAGTCAAAATTATACAAAATATCAGA
• Tissue: pods
• Gene name: LI_gene_167137;
• Additional information: details;

Expression of Ll_transcript_291917

FPKM

• PAB: 1
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.3
• PS3: 0.4
• PW1: 0.6
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_291917

• Blastp: BAG-associated GRAM protein 1 from Arabidopsis with 71.51% of identity
• Blastx: BAG-associated GRAM protein 1 from Arabidopsis with 71.32% of identity
• Eggnog: GRAM domain-containing protein(ENOG410ZP01)
• Kegg: Link to kegg annotations (AT3G59660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445755.1)
• Pfam: C2 domain (PF00168.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;