Id Trinity | TRINITY_DN49178_c3_g1_i13 |
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Name Transcript | Ll_transcript_292997 |
Sequence | TGAGCATTCTATGGTTGAACCATGAGTTTTCTCTATTTCAGGAACTTGCAAATTTACCAACAGTGGAGCTATTTCAGAACGATGGAAGTCCATCTTCAAG GAAACTTTTCATCCTTTGGAATCCTGTTCCACGTCTAAAAGCTATCTTGAATAAAGCTCAGTTTGCTATGGGTACTGACGAGCTAGCTGATGAAATTTCT AATTGTGTCCGTTCAAGCCCAATCGTGGATGTTTCACGACTTTTTGCAGAAATGGTCAAGCATGGTCTTCGCTGCATTGCATTTTGTAAATCACGGAAAC TTTGTGAGCTCGTTTTATCCTATACACGTGAGATTCTTCATGAGACAGCCCCGCATCTGATGGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGA GGAAAGAAGGAAAATAGAGAGTGCATTTTTTGGTGGCAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAGATTGAC GTGACTCTCCATCTAGGATTTCCTGGAAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGAAGAGATAGACCATCTCTTGCTGTATATGTTG CATTTGGTGGGCCTCTTGATCAATACTTTATGAACCACCCAAAGAAACTATTTGAAAGTCCAATAGAATGCTGTCATATTGATTCTCAAAACAAGCAGGT TCTTGAACAGCATTTGGTCTGTGCAGCTTATGAACACCCTCTCTGTGTGCAGTATGATAAGCAGTATTTTGGTTCTTGCTTAGAAAGTGTTTTGATTTCT CTAAAGGCTAGAGGATTCTTGAGTTCTGATCTTTCATCAGATTCTTCTTCTAGAATCTGGAACTACATTGGTCCCGAGAAATTACCCTCGCATTCAGTCA AGATCCGAGCTATAGAAGCTGTAAGATATAGTGTCATCGATCAGGAAGAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCTTTCTTCCAGGTATA TGAAGGTGCAGTGTACATGTGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAATTGCTTTCTGCAAAAAGGCTGATGTGAA BLAST |
Tissue | pods |
Gene name | LI_gene_167165; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_292997
Blastp | ATP-dependent helicase hrq1 from Schizosaccharomyces with 33.05% of identity |
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Blastx | ATP-dependent helicase hrq1 from Schizosaccharomyces with 32.18% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPAC23A1.19c) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415503.1) |
Pfam | Helicase conserved C-terminal domain (PF00271.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |