Ll_transcript_293005

Id TrinityTRINITY_DN49178_c3_g1_i21
Name TranscriptLl_transcript_293005
SequenceTAAAATCAGTCATGTCCTTCACCCAACAGCTTAAGCTTTTGGGAGTTGGTTCTTGACATGGTATTAGAGCCTCTATGATCAAGTAGCCAAGACTTCGATC CTTGCAGTCTCCATTCTTCTAAATAATTAAAAAGAAGTTAAATGTCAGCATAAGCTATGGTTTGCTTGTGTAGTCCACACTTCAAGCCCAAATGGTTATT GCGAGAGGGGGTGTCTTAGATATATAACCTTTCGTGTGCCTTCACCCGATAATGACACAAAGCCATTGCTGGTTATGGACATGGTTGATCATCTTAAGAA TGGAATTGGCTCTAACGGACAGATTGTGCATGTTGAAGATATATGTGCAAGAATAGCGATTCACACAGAGATGTCAATTGAACTATCAGAACAAATGAGA ACTGCACTGGAGTGTATTGGAGTTTCCAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCGCTTAATGAGAAGAATGTTGTTGTGGCTACAATGA CATCTAGTGGCAAATCTCTATGCTATAACCTACCAGTTCTAGAAGTGTTGTGCAAGAGTTCATCATCTTGTGCTTTGTACATATTTCCCACAAAGGCATT AGCTCAAGATCAACTAAGATCTTTGTTACACATGACAAAAGGATTTGACGTTGACTTCAATATTGGTATATATGATGGTGACACTTCTCAAAGTGAGAGG ACATGGCTACGTGAAAATTCTAGATTGTTGATCACGAACCCAGATATGTTGCACATATCAATCTTGCCTCACCATCAGCGATTTAGCCGGATTTTATCAA ATCTACGGTTTGTAGTAATTGATGAAAGTCATACTTACAAGGGAGCATTTGGATGTCATACTGCCCTTATATTAAGGAGGCTCAGGCGACTCTGCTTACA TGTATATGGAACTGTTTCTTCTTTCGTTTTTTCTACTGCAACTTCTGCAAATCCTCGTGAGCATTCTATGGAACTTGCAAATTTACCAACAGTGGAGCTA TTTCAGAACGATGGAAGTCCATCTTCAAGGAAACTTTTCATCCTTTGGAATCCTGTTCCACGTCTAAAAGCTATCTTGAATAAAGCTCAGTTTGCTATGG GTACTGACGAGCTAGCTGATGAAATTTCTAATTGTGTCCGTTCAAGCCCAATCGTGGATGTTTCACGACTTTTTGCAGAAATGGTCAAGCATGGTCTTCG CTGCATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTCGTTTTATCCTATACACGTGAGATTCTTCATGAGACAGCCCCGCATCTGATGGATTCCATA TGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGGAAAATAGAGAGTGCATTTTTTGGTGGCAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTG AGTTGGGCATTGATGTTGGAGAGATTGACGTGACTCTCCATCTAGGATTTCCTGGAAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGAAG AGATAGACCATCTCTTGCTGTATATGTTGCATTTGGTGGGCCTCTTGATCAATACTTTATGAACCACCCAAAGAAACTATTTGAAAGTCCAATAGAATGC TGTCATATTGATTCTCAAAACAAGCAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTTATGAACACCCTCTCTGTGTGCAGTATGATAAGCAGTATTTTG GTTCTTGCTTAGAAAGTGTTTTGATTTCTCTAAAGGCTAGAGGATTCTTGAGTTCTGATCTTTCATCAGATTCTTCTTCTAGAATCTGGAACTACATTGG TCCCGAGAAATTACCCTCGCATTCAGTCAAGATCCGAGCTATAGAAGCTGTAAGATATAGTGTCATCGATCAGGAAGAAAATGAAGTCCTTGAAGAGATA GAGGAAAGCAAGGCTTTCTTCCAGGTATATGAAGGTGCAGTGTACATGTGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAATTG CTTTCTGCAAAAAGGCTGATGTGAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATCGGGGGTAATATTGCTTATCCAGCAATGGTGTC CAACATATCTCCAGAAACAAATGCCCGAGCTCATGCATGCAAAGTAACAACTACTTGGTTTGGTTTTTGTCGTATTTGGAGAGGAAGCAATCAAATCTTT GAGACTGTTGACCTATCACTTCCTCAATATTCATACGAGTCGCAGGCAGCTTGGGTTTCGGTGCCACATTCGATAAAAGAAGCAGTAATCAAGCAGAATT ATGATTTCCGTGGAGGTTTGCATGCTGCTTCACATGCTGTTTTGAATGTAGTTCCCTTACATATAACATGCAACTTGTCTGACTTGGCTTCTGAGTGTCC TGATCCTCGTGATAATCGATACTATCCTGAAAGAATTCTAATATATGATCAACATCCTGGAGGGTGTGGAATTTCAGTACAGGCTCAATCCTGTTTCACA AAGATCTTGACAGCTGCACTTGAGCTTCTCACATGTTGCTGCTGCTCAGCTGAAGTAGGTTGTCCTCATTGTGTTCAGGTTTGGATCAAACATTTCTTTT CTAAAATAGTTCCTTCATTTTTTTCAAGTTGAGCCACTGGGTCATTTTTGGTTAAGAAAATTGATATGTAGATTAGTGTTTTAAATTGTGGTCGCCATTA CGGCAACTCTTTCGGATATATTAATTATGGTCGTTGCGATACGGATTACGGCTATTGCGGTGTGAATTATTTTGTAATTAAAAAATATTTTTGAATTAGA TGCAGCCTAATATGGTCTGATTTGGCTCAAATGCGCATTCTTGTGATTTAGTATTATATCATAATTATAATGTGATGCAGCAGTCATACTGCAACCGCAA TATTGTGGCTGTAATCACTAGATTGGTAGTTTGAATTTTCTTTCCAAGTTGCACGTCCAATTTTGGCATTCATTTTTCATAAAGCTTTTGGTTGTTGTAG AGCTTTGCTTGCCATTCGTATAATGAGGTTTTACACAAACGTTCAGCCATTACGATCGTCAAGGTAATGAGTTGAATGAACCCCCATAAATTTTAATAAT ATTATTTCCATTTCCAATTTTACTTTTATAACCAAAGATATTGTCCATTCAGGGTATTCTGGATGCAGAAAACTAAGAAAAACATGTGCTGACTATATAC TGAAGTCTATTTATGAGTCACCTTTTGGTTGAATAGGAAATTTACTGCATGTAAATAATTTAGTATATTATAATATTAAAAATGCAGAATTATTTGATAT ATTATGTT BLAST
Tissuepods
Gene nameLI_gene_167165; 
Additional informationdetails; 

Expression of Ll_transcript_293005

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_293005
BlastpUncharacterized ATP-dependent helicase YprA from Bacillus with 33.12% of identity
BlastxATP-dependent helicase HRQ1 from Saccharomyces with 33.62% of identity
EggnogDEAD DEAH box helicase(COG1205)
KeggLink to kegg annotations (BSU22220)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019415502.1)
PfamType III restriction enzyme, res subunit (PF04851.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;