Ll_transcript_293014

Id TrinityTRINITY_DN49178_c3_g1_i29
Name TranscriptLl_transcript_293014
SequenceTAAAATCAGTCATGTCCTTCACCCAACAGCTTAAGCTTTTGGGAGTTGGTTCTTGACATGGTATTAGAGCCTCTATGATCAAGTAGCCAAGACTTCGATC CTTGCAGTCTCCATTCTTCTAAATAATTAAAAAGAAGTTAAATGTCAGCATAAGCTATGGTTTGCTTGTGTAGTCCACACTTCAAGCCCAAATGGTTATT GCGAGAGGGGGTGTCTTAGATATATAACCTTTCGTGTGCCTTCACCCGATAATGACACAAAGCCATTGCTGGTTATGGACATGGTTGATCATCTTAAGAA TGGAATTGGCTCTAACGGACAGATTGTGCATGTTGAAGATATATGTGCAAGAATAGCGATTCACACAGAGATGTCAATTGAACTATCAGAACAAATGAGA ACTGCACTGGAGTGTATTGGAGTTTCCAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCGCTTAATGAGAAGAATGTTGTTGTGGCTACAATGA CATCTAGTGGCAAATCTCTATGCTATAACCTACCAGTTCTAGAAGTGTTGTGCAAGAGTTCATCATCTTGTGCTTTGTACATATTTCCCACAAAGGCATT AGCTCAAGATCAACTAAGATCTTTGTTACACATGACAAAAGGATTTGACGTTGACTTCAATATTGGTATATATGATGGTGACACTTCTCAAAGTGAGAGG ACATGGCTACGTGAAAATTCTAGATTGGTAATCTGACAACTAATTTCTTCCTTAGACAGGATATACTTAGGTGAAATGTGCTTCACTTTATATTATATTG CAGTTGATCACGAACCCAGATATGTTGCACATATCAATCTTGCCTCACCATCAGCGATTTAGCCGGATTTTATCAAATCTACGGTATTTATATTGAATAT TAAATAAACTGTATTGATCTGAACTATTAGGTATTTATATGGAATATTACTTGGATTGTTATTGTGGAGAGTTTTACTCTGTCTCAATTCATTAGGTTTG TAGTAATTGATGAAAGTCATACTTACAAGGGAGCATTTGGATGTCATACTGCCCTTATATTAAGGAGGCTCAGGCGACTCTGCTTACATGTATATGGAAC TGTTTCTTCTTTCGTTTTTTCTACTGCAACTTCTGCAAATCCTCGTGAGCATTCTATGGAACTTGCAAATTTACCAACAGTGGAGCTATTTCAGAACGAT GGAAGTCCATCTTCAAGGAAACTTTTCATCCTTTGGAATCCTGTTCCACGTCTAAAAGCTATCTTGAATAAAGCTCAGTTTGCTATGGGTACTGACGAGC TAGCTGATGAAATTTCTAATTGTGTCCGTTCAAGCCCAATCGTGGATGTTTCACGACTTTTTGCAGAAATGGTCAAGCATGGTCTTCGCTGCATTGCATT TTGTAAATCACGGAAACTTTGTGAGCTCGTTTTATCCTATACACGTGAGATTCTTCATGAGACAGCCCCGCATCTGATGGATTCCATATGTGCATATCGT GGTGGCTACATTGCAGAGGAAAGAAGGAAAATAGAGAGTGCATTTTTTGGTGGCAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTG ATGTTGGAGAGATTGACGTGACTCTCCATCTAGGATTTCCTGGAAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGAAGAGATAGACCATC TCTTGCTGTATATGTTGCATTTGGTGGGCCTCTTGATCAATACTTTATGAACCACCCAAAGAAACTATTTGAAAGTCCAATAGAATGCTGTCATATTGAT TCTCAAAACAAGCAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTTATGAACACCCTCTCTGTGTGCAGTATGATAAGCAGTATTTTGGTTCTTGCTTAG AAAGTGTTTTGATTTCTCTAAAGGCTAGAGGATTCTTGAGTTCTGATCTTTCATCAGATTCTTCTTCTAGAATCTGGAACTACATTGGTCCCGAGAAATT ACCCTCGCATTCAGTCAAGATCCGAGCTATAGAAGCTGTAAGATATAGTGTCATCGATCAGGAAGAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAG GCTTTCTTCCAGGTATATGAAGGTGCAGTGTACATGTGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAATTGCTTTCTGCAAAA AGGCTGATGTGAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATCGGGGGTAATATTGCTTATCCAGCAATGGTGTCCAACATATCTCC AGAAACAAATGCCCGAGCTCATGCATGCAAAGTAACAACTACTTGGTTTGGTTTTTGTCGTATTTGGAGAGGAAGCAATCAAATCTTTGAGACTGTTGAC CTATCACTTCCTCAATATTCATACGAGTCGCAGGCAGCTTGGGTTTCGGTGCCACATTCGATAAAAGAAGCAGTAATCAAGCAGAATTATGATTTCCGTG GAGGTTTGCATGCTGCTTCACATGCTGTTTTGAATGTAGTTCCCTTACATATAACATGCAACTTGTCTGACTTGGCTTCTGAGTGTCCTGATCCTCGTGA TAATCGATACTATCCTGAAAGAATTCTAATATATGATCAACATCCTGGAGGGTGTGGAATTTCAGTACAGGCTCAATCCTGTTTCACAAAGATCTTGACA GCTGCACTTGAGCTTCTCACATGTTGCTGCTGCTCAGCTGAAGTAGGTTGTCCTCATTGTGTTCAGGTTTGGATCAAACATTTCTTTTCTAAAATAGTTC CTTCATTTTTTTCAAGTTGAGCCACTGGGTCATTTTTGGTTAAGAAAATTGATATGTAGATTAGTGTTTTAAATTGTGGTCGCCATTACGGCAACTCTTT CGGATATATTAATTATGGTCGTTGCGATACGGATTACGGCTATTGCGGTGTGAATTATTTTGTAATTAAAAAATATTTTTGAATTAGATGCAGCCTAATA TGGTCTGATTTGGCTCAAATGCGCATTCTTGTGATTTAGTATTATATCATAATTATAATGTGATGCAGCAGTCATACTGCAACCGCAATATTGTGGCTGT AATCACTAGATTGGTAGTTTGAATTTTCTTTCCAAGTTGCACGTCCAATTTTGGCATTCATTTTTCATAAAGCTTTTGGTTGTTGTAGAGCTTTGCTTGC CATTCGTATAATGAGGTTTTACACAAACGTTCAGCCATTACGATCGTCAAGGTAATGAGTTGAATGAACCCCCATAAATTTTAATAATATTATTTCCATT TCCAATTTTACTTTTATAACCAAAGATATTGTCCATTCAGGGTATTCTGGATGCAGAAAACTAAGAAAAACATGTGCTGACTATATACTGAAGTCTATTT ATGAGTCACCTTTTGGTTGAATAGGAAATTTACTGCATGTAAATAATTTAGTATATTATAATATTAAAAATGCAGAATTATTTGATATATTATGTT BLAST
Tissuepods
Gene nameLI_gene_167165; 
Additional informationdetails; 

Expression of Ll_transcript_293014

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_293014
BlastpATP-dependent helicase hrq1 from Schizosaccharomyces with 30.5% of identity
BlastxATP-dependent helicase HRQ1 from Saccharomyces with 32.35% of identity
Eggnog-
KeggLink to kegg annotations (SPAC23A1.19c)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019415502.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;