Ll_transcript_292987

• Id Trinity: TRINITY_DN49178_c3_g1_i3
• Name Transcript: Ll_transcript_292987
• Sequence: TGAAGATGTATGCATTCCTTTCCAACCACAAAAAAAGACAAAAACCCATACAGAGCACATTGTCAAGATCTGAATTTTCTTCTTATCTACAAACCCTTGA AATTAAATGTGTAGAAATTTATCCAATGCAGTAGGAGAAATCCAATGCTCACCTAGAAGATTCTTTTAATGCAGATTGTGCATGTTGAAGATATATGTGC AAGAATAGCGATTCACACAGAGATGTCAATTGAACTATCAGAACAAATGAGAACTGCACTGGAGTGTATTGGAGTTTCCAAATTGTATAGTCACCAGGCA GAGTCTATACAAGCCTCGCTTAATGAGAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCTCTATGCTATAACCTACCAGTTCTAGAAGTGT TGTGCAAGAGTTCATCATCTTGTGCTTTGTACATATTTCCCACAAAGGCATTAGCTCAAGATCAACTAAGATCTTTGTTACACATGACAAAAGGATTTGA CGTTGACTTCAATATTGGTATATATGATGGTGACACTTCTCAAAGTGAGAGGACATGGCTACGTGAAAATTCTAGATTGTTGATCACGAACCCAGATATG TTGCACATATCAATCTTGCCTCACCATCAGCGATTTAGCCGGATTTTATCAAATCTACGGTTTGTAGTAATTGATGAAAGTCATACTTACAAGGGAGCAT TTGGATGTCATACTGCCCTTATATTAAGGAGGCTCAGGCGACTCTGCTTACATGTATATGGAACTGTTTCTTCTTTCGTTTTTTCTACTGCAACTTCTGC AAATCCTCGTGAGCATTCTATGGAACTTGCAAATTTACCAACAGTGGAGCTATTTCAGAACGATGGAAGTCCATCTTCAAGGAAACTTTTCATCCTTTGG AATCCTGTTCCACGTCTAAAAGCTATCTTGAATAAAGCTCAGTTTGCTATGGGTACTGACGAGCTAGCTGATGAAATTTCTAATTGTGTCCGTTCAAGCC CAATCGTGGATGTTTCACGACTTTTTGCAGAAATGGTCAAGCATGGTCTTCGCTGCATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTCGTTTTATC CTATACACGTGAGATTCTTCATGAGACAGCCCCGCATCTGATGGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGGAAAATAGAG AGTGCATTTTTTGGTGGCAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAGATTGACGTGACTCTCCATCTAGGAT TTCCTGGAAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGAAGAGATAGACCATCTCTTGCTGTATATGTTGCATTTGGTGGGCCTCTTGA TCAATACTTTATGAACCACCCAAAGAAACTATTTGAAAGTCCAATAGAATGCTGTCATATTGATTCTCAAAACAAGCAGGTTCTTGAACAGCATTTGGTC TGTGCAGCTTATGAACACCCTCTCTGTGTGCAGTATGATAAGCAGTATTTTGGTTCTTGCTTAGAAAGTGTTTTGATTTCTCTAAAGGCTAGAGGATTCT TGAGTTCTGATCTTTCATCAGATTCTTCTTCTAGAATCTGGAACTACATTGGTCCCGAGAAATTACCCTCGCATTCAGTCAAGATCCGAGCTATAGAAGC TGTAAGATATAGTGTCATCGATCAGGAAGAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCTTTCTTCCAGGTATATGAAGGTGCAGTGTACATG TGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAATTGCTTTCTGCAAAAAGGCTGATGTGAAGTATTATACAAAGACTCGAGATT ACACTGATATTCATGTCATCGGGGGTAATATTGCTTATCCAGCAATGGTGTCCAACATATCTCCAGAAACAAATGCCCGAGCTCATGCATGCAAAGTAAC AACTACTTGGTTTGGTTTTTGTCGTATTTGGAGAGGAAGCAATCAAATCTTTGAGACTGTTGACCTATCACTTCCTCAATATTCATACGAGTCGCAGGCA GCTTGGGTTTCGGTGCCACATTCGATAAAAGAAGCAGTAATCAAGCAGAATTATGATTTCCGTGGAGGTTTGCATGCTGCTTCACATGCTGTTTTGAATG TAGTTCCCTTACATATAACATGCAACTTGTCTGACTTGGCTTCTGAGTGTCCTGATCCTCGTGATAATCGATACTATCCTGAAAGAATTCTAATATATGA TCAACATCCTGGAGGGTGTGGAATTTCAGTACAGGCTCAATCCTGTTTCACAAAGATCTTGACAGCTGCACTTGAGCTTCTCACATGTTGCTGCTGCTCA GCTGAAGTAGGTTGTCCTCATTGTGTTCAGAGCTTTGCTTGCCATTCGTATAATGAGGTTTTACACAAACGTTCAGCCATTACGATCGTCAAGGGTATTC TGGATGCAGAAAACTAAGAAAAACATGTGCTGACTATATACTGAAGTCTATTTATGAGTCACCTTTTGGTTGAATAGGAAATTTACTGCATGTAAATAAT TTAGTATATTATAATATTAAAAATGCAGAATTATTTGATATATTATGTT
• Tissue: pods
• Gene name: LI_gene_167165;
• Additional information: details;

Expression of Ll_transcript_292987

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0
• PS2: 0.3
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_292987

• Blastp: ATP-dependent helicase hrq1 from Schizosaccharomyces with 32.32% of identity
• Blastx: ATP-dependent helicase HRQ1 from Saccharomyces with 34% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAC23A1.19c)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415502.1)
• Pfam: Type III restriction enzyme, res subunit (PF04851.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;