Ll_transcript_293017

Id TrinityTRINITY_DN49178_c3_g1_i32
Name TranscriptLl_transcript_293017
SequenceTAATAATGTACAAATGTGATAGAACTTAGTACATATGTTTTATTTTTCTTAATACAATACAATTGACTGTTCCCGTTTTTTAATTTTTCAAAAAAGTTAT TTACAGGGAGTGATCGTTCGTTTCCAAGGAAAAATATTGCAGTGCTGAATCAAATTCCCGCCAAGGCGAAAAAGCGAGTTGGAAGAAGAATGGCCGAGAA GGAAATCCAAGTTCGAGCCCTAACCGGTGACTCCATCATTCTTCACATCGCTCCCACCGCAACCGTCCACGATCTTAAACTTCTTCTCATCGACTCTTTT CCACCTGCCACCAACTCCCCCAACTTCCACCTCTTCTCTAAGGGAGACAAATTAAGATTGCAGGCTCAGATTGGTTCTTATCCCATCGAATGCGGCGAGT TTTTTGTTCTGGTTCCCTTTACTAAGAAGGAATCAACTCAGGCGAACAAGCCGGACCCACTTCAGGCTTCTGTAACTCCCTCGAATGCAACCTCTAATCT TGCTGAATCTACATGGTGCAATATAATGGAGGATTTGTCAAATTTACGTGGGACGACTGATAGTGGTACCTCCAATGCTAATGACACTGACAAGGCATCT AATTTTGAGTATTCTGAACCGAGAAAAGAGAAAATGGTGGTGGAGGATACTTGTTCCGATTTTTTTGACCCGAAAACTAAACGAGGTTTTGGTCCTGATA AGCAAATGGAGCTTCCGTATCATCTCATATTAAACACGCTGCAATATACTAGTGAGGGCATTCTTGGCGAGCATAATTGTGAGGTTTTCTCGAAGGTTTT GGAGTCTGTAAATTGTTTATCAGATCTTCCTATTGGATACTGCAAGTTATTTAAAAGAGCCCGTTTGAAGGGGGGCAGTGGCTTGGGACTGTGTTCTAAT AATGTTGGTAGTACATGCTTGTGTCCTGCATGGTTGAAGATAGTAATGAAGGCATTTGCTTTCATAAACATTTTTTCCGCGTTTCTTCATTTGCAGTGTA GGAAAATAACCGATTGTCTGCTGGAAGAAGCGCTGAATCAGGTTGGAAAGTTTGGAGTCAAACTTGAACTCCAGGACATGGAAAAACTTTCTGTTCTTTG TCCACAGTTAGTATGTTTTGGAGATGACATTGAGAATACAGGATTTGGTGATGTCATTGTTGTGGTAAACCATTCAACAAGCAATAAAGATCAGATTGAA AATAATCCTAAAAGAGCTCGCAAGTGGTTGTATATTTCAAAAATTGTCAGTACATTGAAGAAACGGGATAGCTCTTTCCGAAATAATCTGTGGGTGGCTT TTGAGCAGCTGCCGATTGTCTTAGATGAGGTGGCTGTGGGAATTTCCTTAGAAGAATTGCTTGCAGCAATGAAGGACCATGATTTTGTTGGAAAAGCAAA CAAAGCAAAACGTGTAAAGAGAAGCTCTACTACCTCAAAACCTGCTCTGGATCACCTTGGGTGTCATGACACAAAGCCATTGCTGGTTATGGACATGGTT GATCATCTTAAGAATGGAATTGGCTCTAACGGACAGATTGTGCATGTTGAAGATATATGTGCAAGAATAGCGATTCACACAGAGATGTCAATTGAACTAT CAGAACAAATGAGAACTGCACTGGAGTGTATTGGAGTTTCCAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCGCTTAATGAGAAGAATGTTGT TGTGGCTACAATGACATCTAGTGGCAAATCTCTATGCTATAACCTACCAGTTCTAGAAGTGTTGTGCAAGAGTTCATCATCTTGTGCTTTGTACATATTT CCCACAAAGGCATTAGCTCAAGATCAACTAAGATCTTTGTTACACATGACAAAAGGATTTGACGTTGACTTCAATATTGGTATATATGATGGTGACACTT CTCAAAGTGAGAGGACATGGCTACGTGAAAATTCTAGATTGGTAATCTGACAACTAATTTCTTCCTTAGACAGGATATACTTAGGTGAAATGTGCTTCAC TTTATATTATATTGCAGTTGATCACGAACCCAGATATGTTGCACATATCAATCTTGCCTCACCATCAGCGATTTAGCCGGATTTTATCAAATCTACGGTA TTTATATTGAATATTAAATAAACTGTATTGATCTGAACTATTAGGTATTTATATGGAATATTACTTGGATTGTTATTGTGGAGAGTTTTACTCTGTCTCA ATTCATTAGGTTTGTAGTAATTGATGAAAGTCATACTTACAAGGGAGCATTTGGATGTCATACTGCCCTTATATTAAGGAGGCTCAGGCGACTCTGCTTA CATGTATATGGAACTGTTTCTTCTTTCGTTTTTTCTACTGCAACTTCTGCAAATCCTCGTGAGCATTCTATGGAACTTGCAAATTTACCAACAGTGGAGC TATTTCAGAACGATGGAAGTCCATCTTCAAGGAAACTTTTCATCCTTTGGAATCCTGTTCCACGTCTAAAAGCTATCTTGAATAAAGCTCAGTTTGCTAT GGGTACTGACGAGCTAGCTGATGAAATTTCTAATTGTGTCCGTTCAAGCCCAATCGTGGATGTTTCACGACTTTTTGCAGAAATGGTCAAGCATGGTCTT CGCTGCATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTCGTTTTATCCTATACACGTGAGATTCTTCATGAGACAGCCCCGCATCTGATGGATTCCA TATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGGAAAATAGAGAGTGCATTTTTTGGTGGCAAAATTTGTGGTGTTGCTGCAACTAATGCTCT TGAGTTGGGCATTGATGTTGGAGAGATTGACGTGACTCTCCATCTAGGATTTCCTGGAAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGGGGTGGGAGA AGAGATAGACCATCTCTTGCTGTATATGTTGCATTTGGTGGGCCTCTTGATCAATACTTTATGAACCACCCAAAGAAACTATTTGAAAGTCCAATAGAAT GCTGTCATATTGATTCTCAAAACAAGCAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTTATGAACACCCTCTCTGTGTGCAGTATGATAAGCAGTATTT TGGTTCTTGCTTAGAAAGTGTTTTGATTTCTCTAAAGGCTAGAGGATTCTTGAGTTCTGATCTTTCATCAGATTCTTCTTCTAGAATCTGGAACTACATT GGTCCCGAGAAATTACCCTCGCATTCAGTCAAGATCCGAGCTATAGAAGCTGTAAGATATAGTGTCATCGATCAGGAAGAAAATGAAGTCCTTGAAGAGA TAGAGGAAAGCAAGGCTTTCTTCCAGGTATATGAAGGTGCAGTGTACATGTGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAAT TGCTTTCTGCAAAAAGGCTGATGTGAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATCGGGGGTAATATTGCTTATCCAGCAATGGTG TCCAACATATCTCCAGAAACAAATGCCCGAGCTCATGCATGCAAAGTAACAACTACTTGGTTTGGTTTTTGTCGTATTTGGAGAGGAAGCAATCAAATCT TTGAGACTGTTGACCTATCACTTCCTCAATATTCATACGAGTCGCAGGCAGCTTGGGTTTCGGTGCCACATTCGATAAAAGAAGCAGTAATCAAGCAGAA TTATGATTTCCGTGGAGGTTTGCATGCTGCTTCACATGCTGTTTTGAATGTAGTTCCCTTACATATAACATGCAACTTGTCTGACTTGGCTTCTGAGTGT CCTGATCCTCGTGATAATCGATACTATCCTGAAAGAATTCTAATATATGATCAACATCCTGGAGGGTGTGGAATTTCAGTACAGGCTCAATCCTGTTTCA CAAAGATCTTGACAGCTGCACTTGAGCTTCTCACATGTTGCTGCTGCTCAGCTGAAGTAGGTTGTCCTCATTGTGTTCAGGATCCTTAGTTGAATCATAA GTGGACGACTACAACATGAAAAGGACAAGAGCGTTTGACTCAAGGAATTAAGACAAGGATGCATGAGTTAAGACAGGAGTGCATGAATCAAGGAGATGAG ACGTTGAATAGTTTTCCTTAATCCAGAGTTACAAAGTAGGAAGATTTTCCTCCTTAAAGATAATTCCAAGGCCAATTCCATTTGACACGTTCAAAGGAGG ATTATTTATCAAGGATAAAGGAAGATAATGCATGGCTGGTTTCAAGGGAGACTGAGAAGACTTCTTCCAAGGTATGATTTAAAGATAAAGAGAGGATTTA CACGGCTAGAAAGGAGGAAATTCAGCAAGGTCTTTCCTTTATTTTCTACTTGAAGATAATGTGGAATTTTAGTTGATTAAGTCTTCACAAATCTGGCCAA ATTTCAAAAGGGAAAGCATAAAGATAATATGGATTTCCATTTAGTCAAAAAGAAGGAAATAATTAAGTCTCCATTTAGAATTCAAACCTCCTTGACTCAA GGAGCTTTCCATGGACCAAACTGTGTGGAGTTTTCTACTTGAAGATTAGTTTAATTAAAGTTTTAAAATCAGCCAACAACTCAAAGACTTAGTCAACTAT CTTTTGTTCAACAAATCAACCAAGTTAAATTCAAGTCCTTAAAATAGGATCCAGCCATGGAGGATTTAACTACTTCATATTCAAATCAAAGGGTGTGTGA TCTATGCAAGCCAAAGCTAACTAATTTGGTTGCACCCTCTACATGAATTTAATTTAGGATTTTCGTTTTATCATTTTAAATTAATTAGGAAATTAGTTTA TTTTCATTTTAGACTTAACCAAATTTATTTTTCAGCATATGGCAAACCTTTTGCCTATTTATTGTATTCAGAATTCATTAATGAAAGTTAAGTTTGAATT TGAG BLAST
Tissuepods
Gene nameLI_gene_167165; 
Additional informationdetails; 

Expression of Ll_transcript_293017

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_293017
BlastpATP-dependent helicase hrq1 from Schizosaccharomyces with 30.5% of identity
BlastxATP-dependent helicase hrq1 from Schizosaccharomyces with 30.35% of identity
Eggnog-
KeggLink to kegg annotations (SPAC23A1.19c)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019415503.1)
PfamHelicase conserved C-terminal domain (PF00271.30)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;